RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 C22orf39Q6P5X5 142 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 TMEM71Q6P5X7 295 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 CLEC9AQ6UXN8 241 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 DPY19L3Q6ZPD9 716 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 BHLHA9Q7RTU4 235 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 ZNF572Q7Z3I7 529 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 KCNMB4Q86W47 210 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 PLXDC1Q8IUK5 500 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 CREBRFQ8IUR6 639 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 SIX6OS1Q8N1H7 587 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 RYBPQ8N488 228 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 AOPEPQ8N6M6 819 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 OR10G6Q8NH81 332 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 PATE1Q8WXA2 126 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 CASKIN2Q8WXE0 1202 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 OR1E3Q8WZA6 343 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 NRGNQ92686 78 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 TAF4BQ92750 862 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 C18orf8Q96DM3 657 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 TRAPPC9Q96Q05 1148 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 PPP1R9BQ96SB3 815 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 RUFY1Q96T51 708 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 WRAP53Q9BUR4 548 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 NAT10Q9H0A0 1025 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 TMEM168Q9H0V1 697 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 HSD3B7Q9H2F3 369 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 SMURF2Q9HAU4 748 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 SACM1LQ9NTJ5 587 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 TMEM140Q9NV12 185 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 PIH1D1Q9NWS0 290 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 ARHGEF38Q9NXL2 777 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 SLC23A1Q9UHI7 598 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 RPH3AQ9Y2J0 694 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 PMF1-BGLAPU3KQ54 211 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 ANKRD12Q6UB98 2062 aa4.91□□□□□ -1.62
CTNNA1-232ENST00000522013 TCAF2A6NFQ2 919 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 RNF212BA8MTL3 300 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 TULP2O00295 520 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 CCL21O00585 134 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 E2F3O00716 465 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PPM1DO15297 605 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SMAD6O43541 496 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 CEACAM4O75871 244 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 CYP7B1O75881 506 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 TMEM63AO94886 807 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 GASTP01350 101 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PLEKP08567 350 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 ATP1A3P13637 1013 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 EEF1GP26641 437 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PIK3CGP48736 1102 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PEX5P50542 639 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PLK1P53350 603 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SESN2P58004 480 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 BPIFB4P59827 614 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 RPS15P62841 145 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 NR1D2Q14995 579 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 IQCB1Q15051 598 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 KRT31Q15323 416 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 VWA3BQ502W6 1294 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 TCP11X2Q5H9J9 407 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 RAB41Q5JT25 222 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 RABGAP1LQ5R372 815 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 VWA5B1Q5TIE3 1220 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PM20D1Q6GTS8 502 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 MSANTD2Q6P1R3 559 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 DUS1LQ6P1R4 473 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SLC30A9Q6PML9 568 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 PCGF5Q86SE9 256 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SYVN1Q86TM6 617 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 TP53I13Q8NBR0 393 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 FBXL13Q8NEE6 735 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 OR52K2Q8NGK3 314 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 OR14K1Q8NGZ2 314 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 LMO3Q8TAP4 145 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 GRHL3Q8TE85 626 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 ASB12Q8WXK4 309 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 INPP5DQ92835 1189 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 GCDHQ92947 438 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 AZIN2Q96A70 460 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SLC7A6OSQ96CW6 309 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 ARHGEF26Q96DR7 871 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 AJUBAQ96IF1 538 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SERPINB11Q96P15 392 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 GPHA2Q96T91 129 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 BPIFA3Q9BQP9 254 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 HEPHQ9BQS7 1158 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 TUBGCP2Q9BSJ2 902 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 FEM1AQ9BSK4 669 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 CRACR2AQ9BSW2 395 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 APOOQ9BUR5 198 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 C11orf54Q9H0W9 315 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 NDST4Q9H3R1 872 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 L2HGDHQ9H9P8 463 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 LHX9Q9NQ69 397 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 FGF21Q9NSA1 209 aa4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 SPATS2LQ9NUQ6 558 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-232ENST00000522013 RAB20Q9NX57 234 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms