RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ERICH2A1L162 156 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 SMCO2A6NFE2 343 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 TMEM189-UBE2V1I3L0A0 370 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 SYT5O00445 386 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 MSH4O15457 936 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 ERLIN2O94905 339 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 VNN2O95498 520 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 PMS2P2O95744 297 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 CSF1P09603 554 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 IGHV4-30-4P0DP06 118 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 RXRAP19793 462 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 GPR12P47775 334 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 MCM2P49736 904 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 GNAQP50148 359 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 PEX5P50542 639 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 PTENP60484 403 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 ZNF33AQ06730 810 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 CAPSQ13938 189 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 RPE65Q16518 533 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 UPP1Q16831 310 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 CCDC181Q5TID7 509 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 JAKMIP3Q5VZ66 844 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 CWC27Q6UX04 472 aaKnown RBP6.35□□□□□ -1.39
USP53-206ENST00000510737 TUBA1AQ71U36 451 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 FAM186BQ8IYM0 893 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 HACE1Q8IYU2 909 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 ZNF441Q8N8Z8 693 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 IL17RCQ8NAC3 791 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 ZNF527Q8NB42 609 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 MCPH1Q8NEM0 835 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 MED8Q96G25 268 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 TNIP3Q96KP6 325 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 TUBA1CQ9BQE3 449 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 TRIM6Q9C030 488 aaPredicted RBP6.35□□□□□ -1.39
USP53-206ENST00000510737 MMP28Q9H239 520 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 TLR8Q9NR97 1041 aaKnown RBP6.35□□□□□ -1.39
USP53-206ENST00000510737 DHDHQ9UQ10 334 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 C2CD3Q4AC94 2353 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 A0A096LPK6 155 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 OR6C68A6NDL8 312 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 CALM1P0DP23 149 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 CALM2P0DP24 149 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 CALM3P0DP25 149 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 SFNP31947 248 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 SERPINF1P36955 418 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 NAPAP54920 295 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 CLDN6P56747 220 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 SLC18A2Q05940 514 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 MBTD1Q05BQ5 628 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 NCBP1Q09161 790 aaKnown RBP6.34□□□□□ -1.39
USP53-206ENST00000510737 CCDC173Q0VFZ6 552 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 ME3Q16798 604 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 SLC27A1Q6PCB7 646 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 KLHL17Q6TDP4 642 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 DNAJB7Q7Z6W7 309 aaPredicted RBP6.34□□□□□ -1.39
USP53-206ENST00000510737 SETD9Q8NE22 299 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 RASSF8Q8NHQ8 419 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 SECTM1Q8WVN6 248 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 PSPC1Q8WXF1 523 aaKnown RBP6.34□□□□□ -1.39
USP53-206ENST00000510737 RIT2Q99578 217 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 JPH2Q9BR39 696 aaPredicted RBP6.34□□□□□ -1.39
USP53-206ENST00000510737 DHX33Q9H6R0 707 aaKnown RBP6.34□□□□□ -1.39
USP53-206ENST00000510737 UBTD1Q9HAC8 227 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 LRFN1Q9P244 771 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 MMP17Q9ULZ9 603 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 CCL26Q9Y258 94 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 BOD1L1Q8NFC6 3051 aa6.34□□□□□ -1.39
USP53-206ENST00000510737 NOTCH2Q04721 2471 aa6.34□□□□□ -1.4
USP53-206ENST00000510737 DOPEY2Q9Y3R5 2298 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 FLNCQ14315 2725 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 SGK1O00141 431 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 AP5Z1O43299 807 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 TRAPPC3O43617 180 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 PSMD10O75832 226 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 GABRR2P28476 465 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 CXCR3P49682 368 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 SETQ01105 290 aaPredicted RBP6.33□□□□□ -1.4
USP53-206ENST00000510737 GRIK2Q13002 908 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 TRDNQ13061 729 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 IL13RA2Q14627 380 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 RABEPKQ7Z6M1 372 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 KLHDC8BQ8IXV7 354 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 CIARTQ8N365 385 aaPredicted RBP6.33□□□□□ -1.4
USP53-206ENST00000510737 ATG16L2Q8NAA4 619 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 FGF11Q92914 225 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 RILPL2Q969X0 211 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 UHRF2Q96PU4 802 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 TRAPPC9Q96Q05 1148 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 EPYCQ99645 322 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 CHMP4BQ9H444 224 aaKnown RBP6.33□□□□□ -1.4
USP53-206ENST00000510737 ECT2Q9H8V3 914 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 YIPF1Q9Y548 306 aa6.33□□□□□ -1.4
USP53-206ENST00000510737 TNRC6BQ9UPQ9 1833 aaKnown RBP6.33□□□□□ -1.4
USP53-206ENST00000510737 TDRD15B5MCY1 1934 aaKnown RBP6.33□□□□□ -1.4
USP53-206ENST00000510737 FBN3Q75N90 2809 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 MYH9P35579 1960 aaKnown RBP6.32□□□□□ -1.4
USP53-206ENST00000510737 E7EWF7 191 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 KDM4BO94953 1096 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 CTPS1P17812 591 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms