RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TCF3P15923 654 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 AOAHP28039 575 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ARSFP54793 590 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PHC1P78364 1004 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 LAPTM5Q13571 262 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PGS1Q32NB8 556 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 C11orf91Q3C1V1 193 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 RUNDC3AQ59EK9 446 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 Q6ZVU0 165 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ANKRD46Q86W74 232 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 GFM2Q969S9 779 aaKnown RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 AURKBQ96GD4 344 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 LMLNQ96KR4 655 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 MUS81Q96NY9 551 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 TSSK3Q96PN8 268 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ATG10Q9H0Y0 220 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 GORASP2Q9H8Y8 452 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 HCFC1R1Q9NWW0 138 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 SLC25A13Q9UJS0 675 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PCDHB14Q9Y5E9 798 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PABPN1LA6NDY0 278 aaKnown RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 GNGT2O14610 69 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 GRM6O15303 877 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 CXCL14O95715 111 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 B3GALT4O96024 378 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ITPKAP23677 461 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SPINT3P49223 89 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 RPS14P62263 151 aaKnown RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 NKG7Q16617 165 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SMU1Q2TAY7 513 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 PTCHD3Q3KNS1 767 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SERPINA13PQ6UXR4 307 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 NECAB2Q7Z6G3 386 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 AADATQ8N5Z0 425 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ZNF548Q8NEK5 533 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SCAMP4Q969E2 229 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 NCLNQ969V3 563 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SH3GL1Q99961 368 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SLC12A9Q9BXP2 914 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SLC29A3Q9BZD2 475 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 TUBA8Q9NY65 449 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 PKD2L2Q9NZM6 624 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SLC22A14Q9Y267 594 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 HS3ST2Q9Y278 367 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 MYOFQ9NZM1 2061 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 COL4A6Q14031 1691 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ABHD14A-ACY1A0A1B0GW23 586 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 H0Y858 1186 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 CXCR6O00574 342 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 FGF18O76093 207 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 PRKD3O94806 890 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 CST1P01037 141 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ACRP10323 421 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 TACR1P25103 407 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 S100A3P33764 101 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 CCR2P41597 374 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 METTL2BQ6P1Q9 378 aaKnown RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 NEK5Q6P3R8 708 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ELMOD1Q8N336 334 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 RNF175Q8N4F7 328 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 BEND7Q8N7W2 519 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ASB11Q8WXH4 323 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SLC47A1Q96FL8 570 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 P2RY13Q9BPV8 354 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 INPP5KQ9BT40 448 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 NPLQ9BXD5 320 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SMURF2Q9HAU4 748 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 RC3H2Q9HBD1 1191 aaKnown RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 HPS4Q9NQG7 708 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 SNX6Q9UNH7 406 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 PPIL1Q9Y3C6 166 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 G3V2T6 193 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ATP1B2P14415 290 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 CSF2RAP15509 400 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ELK4P28324 431 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 HALP42357 657 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ALDH3A2P51648 485 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 DAG1Q14118 895 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ZBED5Q49AG3 693 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ZNF648Q5T619 568 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 ZDHHC13Q8IUH4 622 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 HS3ST5Q8IZT8 346 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 KREMEN2Q8NCW0 462 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 OR10Q1Q8NGQ4 319 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 APIPQ96GX9 242 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 EGLN2Q96KS0 407 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 TOX2Q96NM4 488 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 CCDC115Q96NT0 180 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 PHF12Q96QT6 1004 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 MCCC1Q96RQ3 725 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-209ENST00000494623 BBS2Q9BXC9 721 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 EBF1Q9UH73 591 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 TBX21Q9UL17 535 aa10.93□□□□□ -0.66
CHMP3-209ENST00000494623 UPK3BL1B0FP48 263 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms