RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 TTC4O95801 387 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PVRP15151 417 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 ST6GAL1P15907 406 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PGAM1P18669 254 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 MCM3P25205 808 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 NDUFS1P28331 727 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PRDX3P30048 256 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 ELK3P41970 407 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 BRD3Q15059 726 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 MSS51Q4VC12 460 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 CRTC2Q53ET0 693 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 FAM199XQ6PEV8 388 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 CES3Q6UWW8 571 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 ZNF517Q6ZMY9 492 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 LDB1Q86U70 411 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 TMEM135Q86UB9 458 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 CARFQ8N187 725 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 FBXO36Q8NEA4 188 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 OR4L1Q8NH43 312 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PEX13Q92968 403 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 SGSM3Q96HU1 749 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 FCRL4Q96PJ5 515 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 MVB12BQ9H7P6 319 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PDE7BQ9NP56 450 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 LHX9Q9NQ69 397 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 TREX1Q9NSU2 369 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 ZC3H7BQ9UGR2 993 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 PADI1Q9ULC6 663 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
SEC61A1-206ENST00000491668 NBASA2RRP1 2371 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 FAM237BA0A1B0GVD1 139 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 GSAPA4D1B5 854 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 IQCF5A8MTL0 148 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 J3QKU1 62 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 LIN7AO14910 233 aaPredicted RBP12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 TP73O15350 636 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 SUV39H1O43463 412 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 HCRTR1O43613 425 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 SLC28A2O43868 658 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 GSTM1P09488 218 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 TCN2P20062 427 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ARNTP27540 789 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 NMBRP28336 390 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 CCR7P32248 378 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 CCR10P46092 362 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 GSTM4Q03013 218 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ACY1Q03154 408 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ABRQ12979 859 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 GPS2Q13227 327 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 KCNAB2Q13303 367 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 DNASE1L3Q13609 305 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 KRT33BQ14525 404 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 DEFB109BQ30KR1 87 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 LCN10Q6JVE6 187 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ARMC6Q6NXE6 501 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 C16orf46Q6P387 395 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 AFTPHQ6ULP2 937 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 BPHLQ86WA6 291 aaPredicted RBP12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 AMIGO1Q86WK6 493 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 VRK3Q8IV63 474 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 GABPB2Q8TAK5 448 aaPredicted RBP12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ELMO1Q92556 727 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 CATSPER2Q96P56 530 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 TRAPPC9Q96Q05 1148 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 TTC1Q99614 292 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 EFHD1Q9BUP0 239 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 KLHL25Q9H0H3 589 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 SLC25A18Q9H1K4 315 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ADNPQ9H2P0 1102 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 PPANQ9NQ55 473 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 C1GALT1Q9NS00 363 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 ZDHHC18Q9NUE0 388 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 SPHK1Q9NYA1 384 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 PCDHGA6Q9Y5G7 932 aa12.29□□□□□ -0.44
SEC61A1-206ENST00000491668 RELNP78509 3460 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 SNRNP200O75643 2136 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 SEC16AO15027 2179 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 E7ESA3 106 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 K7EM74 188 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 IFRD1O00458 451 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 KATNA1O75449 491 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 USP1O94782 785 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 VAPBO95292 243 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 FTH1P02794 183 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 SFTPCP11686 197 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 MAGEA4P43358 317 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 ARL4DP49703 201 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms