RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PCDHGB7Q9Y5F8 929 aa19.65■□□□□ 0.74
PDLIM4-206ENST00000474421 FLNCQ14315 2725 aa19.65■□□□□ 0.74
PDLIM4-206ENST00000474421 HECTD1Q9ULT8 2610 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 KPNA5O15131 536 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 CD3EAPO15446 510 aaKnown RBP19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 GPC4O75487 556 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 TMEM63AO94886 807 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 CAPN1P07384 714 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 ZSCAN5DPP0CG00 497 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 TPBGLP0DKB5 382 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 PKLRP30613 574 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 PTGIRP43119 386 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 NPY2RP49146 381 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 CCL11P51671 97 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 RRADP55042 308 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 SESN2P58004 480 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 BASP1P80723 227 aaKnown RBP19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 SEMA3AQ14563 771 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 IGFBP7Q16270 282 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 KYNUQ16719 465 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 PTRHD1Q6GMV3 140 aaKnown RBP19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 RHBDD2Q6NTF9 364 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 TLDC1Q6P9B6 456 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 MED25Q71SY5 747 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 ATCAYQ86WG3 371 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 LRRC6Q86X45 466 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 RAB43Q86YS6 212 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 DCUN1D3Q8IWE4 304 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 TMEM102Q8N9M5 508 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 FLVCR1-AS1Q8TAF5 88 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 LZTFL1Q9NQ48 299 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 GNPTGQ9UJJ9 305 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 PLAGL1Q9UM63 463 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 MRFAP1Q9Y605 127 aa19.64■□□□□ 0.73
PDLIM4-206ENST00000474421 PTPN13Q12923 2485 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 ZSCAN9O15535 394 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 SLCO2B1O94956 709 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 FGGP02679 453 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 AOAHP28039 575 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 CDK16Q00536 496 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 CHAF1BQ13112 559 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 ZIC1Q15915 447 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 PAPD7Q5XG87 772 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 ZNF385CQ66K41 422 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 TTC23LQ6PF05 361 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 HPS6Q86YV9 775 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 TRIM58Q8NG06 486 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 IP6K3Q96PC2 410 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 MLXIPLQ9NP71 852 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 TREX1Q9NSU2 369 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 INTS7Q9NVH2 962 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 IRAK4Q9NWZ3 460 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 GPN3Q9UHW5 284 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 PLCL2Q9UPR0 1127 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 CDYLQ9Y232 598 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 ZNF451Q9Y4E5 1061 aa19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 TNRC6AQ8NDV7 1962 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-206ENST00000474421 COL12A1Q99715 3063 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 H3BMH7 237 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 NDUFS3O75489 264 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 CEACAM4O75871 244 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 PDGFAP04085 211 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 GABRA4P48169 554 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 DEFB110Q30KQ9 67 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 VRK3Q8IV63 474 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 DNAJC22Q8N4W6 341 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 CFAP61Q8NHU2 1237 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 DENND1AQ8TEH3 1009 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 MIB2Q96AX9 1013 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 RAB11FIP5Q9BXF6 653 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 TXLNGQ9NUQ3 528 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 FER1L5A0AVI2 2057 aa19.62■□□□□ 0.73
PDLIM4-206ENST00000474421 IQCF5A8MTL0 148 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 PFDN6O15212 129 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 S1PR4O95977 384 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 CD9P21926 228 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 RPS3P23396 243 aaKnown RBP eCLIP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 CD97P48960 835 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 DCDP81605 110 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 COLEC12Q5KU26 742 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 ARMC3Q5W041 872 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 MRNIPQ6NTE8 343 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 LDB1Q86U70 411 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 RAB42Q8N4Z0 105 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 ZBTB2Q8N680 514 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 LKAAEAR1Q8TD35 194 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 DLG3Q92796 817 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 NDC1Q9BTX1 674 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 SPRTNQ9H040 489 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 MRM3Q9HC36 420 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 MARCH4Q9P2E8 410 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 NDOR1Q9UHB4 597 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 SLC39A10Q9ULF5 831 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 PLAAQ9Y263 795 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 DOPEY2Q9Y3R5 2298 aa19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 RP1L1Q8IWN7 2480 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-206ENST00000474421 ANKRD12Q6UB98 2062 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 RELNP78509 3460 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 NRDCO43847 1150 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 FKBP9O95302 570 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms