RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CD2P06729 351 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UROSP10746 265 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CXCR1P25024 350 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SERPINA9Q86WD7 417 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BCAS3Q9H6U6 928 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SPATA7Q9P0W8 599 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PREX2Q70Z35 1606 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ABCC3O15438 1527 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CPS1P31327 1500 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ACTL6BO94805 426 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RENP00797 406 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PPIBP23284 216 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AFF1P51825 1210 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FAM76BQ5HYJ3 339 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SPAG16Q8N0X2 631 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TSEN2Q8NCE0 465 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SPPL2BQ8TCT7 592 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDC7O00311 574 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CLPXO76031 633 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DGKGP49619 791 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PRKCDQ05655 676 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TWIST2Q8WVJ9 160 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BLOC1S4Q9NUP1 217 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GTF2IRD1Q9UHL9 959 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MFHAS1Q9Y4C4 1052 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TSPAN4O14817 238 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC16A8O95907 504 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ENTPD1P49961 510 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDH15P55291 814 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TARDBPQ13148 414 aaKnown RBP eCLIP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GPM6BQ13491 265 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ARHGAP40Q5TG30 622 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NDUFS4O43181 175 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MAFO75444 373 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 VNN2O95498 520 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ITIH1P19827 911 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SDC2P34741 201 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TAS2R40P59535 323 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ITGB3BPQ13352 177 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BICRALQ6AI39 1079 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PNLDC1Q8NA58 520 aaKnown RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PROKR2Q8NFJ6 384 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 THAP3Q8WTV1 239 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC38A4Q969I6 547 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SERINC1Q9NRX5 453 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 HPF1Q9NWY4 346 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 WASF3Q9UPY6 502 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AFDNP55196 1824 aaKnown RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BORCS7-ASMTA0A0B4J1R7 106 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 M0R036 132 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ATP6V1G1O75348 118 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 IFNW1P05000 195 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MMP14P50281 582 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 S100A12P80511 92 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C6orf52Q5T4I8 152 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 USP30Q70CQ3 517 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 COMTD1Q86VU5 262 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR8H1Q8NGG4 311 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 STYXQ8WUJ0 223 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BORCS7Q96B45 105 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PTERQ96BW5 349 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LRMDAQ9H2I8 198 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 E7ENX8 843 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 XIAPP98170 497 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PARP15Q460N3 678 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 POTEHQ6S545 545 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NET1Q7Z628 596 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SIDT2Q8NBJ9 832 aaKnown RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR4K17Q8NGC6 315 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GLOD4Q9HC38 313 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SCDO00767 359 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LGR5O75473 907 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RLN2P04090 185 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TACR2P21452 398 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PLP2Q04941 152 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ENPP2Q13822 863 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PRAMEF17Q5VTA0 474 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CROCCP3Q8IVE0 287 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 THEM6Q8WUY1 208 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KLHL6Q8WZ60 621 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PYCR2Q96C36 320 aa13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PRDM15P57071 1507 aaPredicted RBP13.01□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF536O15090 1300 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms