RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 KIR2DS5Q14953 304 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 C6orf132Q5T0Z8 1188 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 TTC23LQ6PF05 361 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 ZNF761Q86XN6 746 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-203ENST00000471658 TRIM48Q8IWZ4 208 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 ARL14Q8N4G2 192 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 KYQ8NBH2 561 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 PDPRQ8NCN5 879 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 PPFIBP2Q8ND30 876 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 OR52E1Q8NGJ3 308 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 RDH11Q8TC12 318 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 MAPK15Q8TD08 544 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 RAD51AP1Q96B01 352 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 ATG10Q9H0Y0 220 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 SLC40A1Q9NP59 571 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 INTS9Q9NV88 658 aaKnown RBP18.65■□□□□ 0.58
PSPC1-203ENST00000471658 OXSMQ9NWU1 459 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 NCDNQ9UBB6 729 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 PTBP2Q9UKA9 531 aaKnown RBP18.65■□□□□ 0.58
PSPC1-203ENST00000471658 COLEC10Q9Y6Z7 277 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 CABIN1Q9Y6J0 2220 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 WDR87Q6ZQQ6 2873 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 RPN2P04844 631 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 ANXA5P08758 320 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 IMPA1P29218 277 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 CDKL1Q00532 357 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 FASTKQ14296 549 aaKnown RBP18.64■□□□□ 0.57
PSPC1-203ENST00000471658 ZCCHC23Q6ZST2 131 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 RPS27LQ71UM5 84 aaKnown RBP18.64■□□□□ 0.57
PSPC1-203ENST00000471658 TAX1BP1Q86VP1 789 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 C17orf82Q86X59 251 aaPredicted RBP18.64■□□□□ 0.57
PSPC1-203ENST00000471658 NUDCD3Q8IVD9 361 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 ARFGAP2Q8N6H7 521 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 GPR156Q8NFN8 814 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 MAGEC3Q8TD91 643 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 CCDC138Q96M89 665 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 PHOX2BQ99453 314 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 TMEM79Q9BSE2 394 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 MENTQ9BUN1 341 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 KCNH6Q9H252 994 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 CNOT10Q9H9A5 744 aaKnown RBP18.64■□□□□ 0.57
PSPC1-203ENST00000471658 SEMA4GQ9NTN9 838 aa18.64■□□□□ 0.57
PSPC1-203ENST00000471658 STOX2Q9P2F5 926 aaPredicted RBP18.64■□□□□ 0.57
PSPC1-203ENST00000471658 PPM1DO15297 605 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 YKT6O15498 198 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 IPO13O94829 963 aaKnown RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 S100BP04271 92 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 SLC2A4P14672 509 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 BGNP21810 368 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 GDF5P43026 501 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 HSPA7P48741 367 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 PRKAA2P54646 552 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 AP1S2P56377 157 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 GPR18Q14330 331 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 CES4AQ5XG92 561 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 TTC19Q6DKK2 380 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 SLC9B2Q86UD5 537 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 SLC35F3Q8IY50 421 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 EID2Q8N6I1 236 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 ZNF480Q8WV37 535 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 FBXL8Q96CD0 374 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 TMEM237Q96Q45 408 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 KIR3DX1Q9H7L2 352 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 POT1Q9NUX5 634 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 NLGN3Q9NZ94 848 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 POLG2Q9UHN1 485 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 MID2Q9UJV3 735 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 ICKQ9UPZ9 632 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 MUC6Q6W4X9 2439 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 PABPN1LA6NDY0 278 aaKnown RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 CDX4O14627 284 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 FGF3P11487 239 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 ALDH18A1P54886 795 aaKnown RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 HHEXQ03014 270 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 SETDB1Q15047 1291 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 C14orf28Q4W4Y0 310 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-203ENST00000471658 SULT1C3Q6IMI6 304 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 AGTRAPQ6RW13 159 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 OR4C6Q8NH72 309 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 PYCR2Q96C36 320 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 WWOXQ9NZC7 414 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 BTBD3Q9Y2F9 522 aa18.63■□□□□ 0.57
PSPC1-203ENST00000471658 RALGAPA1Q6GYQ0 2036 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 BIRC5O15392 142 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 SIGLEC6O43699 453 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 PCDHGA12O60330 932 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 TRIM13O60858 407 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 TGM1P22735 817 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 NDUFS1P28331 727 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 EEF1DP29692 281 aaKnown RBP18.62■□□□□ 0.57
PSPC1-203ENST00000471658 CCR10P46092 362 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 NAGLUP54802 743 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 NFKB2Q00653 900 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 GUCY1A3Q02108 690 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 NAE1Q13564 534 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 UNC50Q53HI1 259 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 LIPMQ5VYY2 423 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 OR4E2Q8NGC2 313 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 GATA5Q9BWX5 397 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms