RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PKMP14618 531 aaKnown RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 CHRM3P20309 590 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 MPP1Q00013 466 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 THOC5Q13769 683 aaKnown RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 TMED2Q15363 201 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 LONRF1Q17RB8 773 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 PLEKHS1Q5SXH7 462 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 FAM199XQ6PEV8 388 aaPredicted RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 CNSTQ6PJW8 725 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 CDHR3Q6ZTQ4 885 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 HOOK3Q86VS8 718 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 ZSCAN1Q8NBB4 408 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 SLC45A3Q96JT2 553 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 WDR83Q9BRX9 315 aaKnown RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 INTS10Q9NVR2 710 aaKnown RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 KPNA5O15131 536 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 HAUS5O94927 633 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 C1orf105O95561 183 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 CTSBP07858 339 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 ERVK-10P10266 1014 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 PKLRP30613 574 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 RAB28P51157 221 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 CLCN7P51798 805 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 CRYMQ14894 314 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 TMTC4Q5T4D3 741 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 PCGF5Q86SE9 256 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 BPHLQ86WA6 291 aaPredicted RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 DCUN1D3Q8IWE4 304 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 EXD3Q8N9H8 876 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
XRN1-203ENST00000463916 GIMAP7Q8NHV1 300 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 SKA2Q8WVK7 121 aaPredicted RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 KRT12Q99456 494 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 EBNA1BP2Q99848 306 aaKnown RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 TRIM31Q9BZY9 425 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 LATS2Q9NRM7 1088 aa12.53□□□□□ -0.4
XRN1-203ENST00000463916 ISM1B1AKI9 464 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 CCDC188H7C350 402 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 SCRG1O75711 98 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 MATN4O95460 622 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 PGAM1P18669 254 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 CD9P21926 228 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 DLSTP36957 453 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 PAFAH1B1P43034 410 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 BDKRB1P46663 353 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 TBR1Q16650 682 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 BBS9Q3SYG4 887 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 ATP1A1-AS1Q5TC04 95 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 HIBCHQ6NVY1 386 aaPredicted RBP12.52□□□□□ -0.4
XRN1-203ENST00000463916 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.4
XRN1-203ENST00000463916 TAX1BP1Q86VP1 789 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 ZBTB2Q8N680 514 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 LSM14AQ8ND56 463 aaKnown RBP12.52□□□□□ -0.4
XRN1-203ENST00000463916 FCRL4Q96PJ5 515 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 LHX9Q9NQ69 397 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 IARS2Q9NSE4 1012 aaKnown RBP12.52□□□□□ -0.4
XRN1-203ENST00000463916 FBXO5Q9UKT4 447 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 PADI1Q9ULC6 663 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.4
XRN1-203ENST00000463916 TMEM150CB9EJG8 249 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 H3BMM5 538 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 TK2O00142 265 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 PFDN6O15212 129 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 SEC31AO94979 1220 aaKnown RBP12.52□□□□□ -0.41
XRN1-203ENST00000463916 MSL3P1P0C860 447 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 PRKAR1AP10644 381 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 GABRB3P28472 473 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 ITGA8P53708 1063 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 GPS2Q13227 327 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 CUL1Q13616 776 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 MORF4L2Q15014 288 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 CYB5D1Q6P9G0 228 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 KCNMB4Q86W47 210 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 TMEM126BQ8IUX1 230 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 C19orf47Q8N9M1 422 aaKnown RBP12.52□□□□□ -0.41
XRN1-203ENST00000463916 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 CT55Q8WUE5 264 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 STARD8Q92502 1023 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.41
XRN1-203ENST00000463916 WBP1Q96G27 269 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 SLC17A6Q9P2U8 582 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 RNF14Q9UBS8 474 aa12.52□□□□□ -0.41
XRN1-203ENST00000463916 H3BMH7 237 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 RASGRF2O14827 1237 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 RPN2P04844 631 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 ITGB2P05107 769 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 TCN2P20062 427 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 ELK3P41970 407 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 GABRA4P48169 554 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 ETF1P62495 437 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms