RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RNF128Q8TEB7 428 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 XAGE5Q8WWM1 108 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 MCMBPQ9BTE3 642 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 MRM3Q9HC36 420 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 MKKSQ9NPJ1 570 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 EQTNQ9NQ60 294 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ASF1AQ9Y294 204 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 WDR45Q9Y484 360 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CHEK1O14757 476 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SNX3O60493 162 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CTSHP09668 335 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ETFAP13804 333 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 RAC2P15153 192 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PON2Q15165 354 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SF1Q15637 639 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 ESCO2Q56NI9 601 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 LDLRAP1Q5SW96 308 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CD163Q86VB7 1156 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ZNF584Q8IVC4 421 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 NATD1Q8N6N6 113 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SH3RF3Q8TEJ3 882 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 RXFP2Q8WXD0 754 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 LRFN5Q96NI6 719 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CIB1Q99828 191 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 AARSD1Q9BTE6 412 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 TMLHEQ9NVH6 421 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 DDX43Q9NXZ2 648 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 UBFD1O14562 309 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 FFAR3O14843 346 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 GPR42O15529 346 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 GNPDA1P46926 289 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ZNF155Q12901 538 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 PLA2G4EQ3MJ16 856 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 GLYATQ6IB77 296 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 FAM131BQ86XD5 332 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 TTLL6Q8N841 843 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SHKBP1Q8TBC3 707 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 TMEM176AQ96HP8 235 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ZNF668Q96K58 619 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 ATG10Q9H0Y0 220 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PCDHA2Q9Y5H9 948 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 A0A0J9YYE9 177 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A9O60656 530 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SCELO95171 688 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 HLA-DPB1P04440 258 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 IL7P13232 177 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A6P19224 532 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A1P22309 533 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A4P22310 534 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 RPS3P23396 243 aaKnown RBP eCLIP8.79□□□□□ -1
NIPBL-202ENST00000448238 CCND3P30281 292 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 FXR1P51114 621 aaKnown RBP eCLIP8.79□□□□□ -15e-6■■■□□ 17.8
NIPBL-202ENST00000448238 NDST1P52848 882 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 FMR1Q06787 632 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■□□□ 13.4
NIPBL-202ENST00000448238 CTBP1Q13363 440 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 DHCR24Q15392 516 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SGCBQ16585 318 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 OGFOD2Q6N063 350 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 GTPBP8Q8N3Z3 284 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 MYLIPQ8WY64 445 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A7Q9HAW7 530 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A10Q9HAW8 530 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UGT1A8Q9HAW9 530 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 FOLH1BQ9HBA9 442 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 REREQ9P2R6 1566 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 C17orf102A2RUQ5 167 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 DUXAA6NLW8 204 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SERPINA7P05543 415 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CD36P16671 472 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 EIF4BP23588 611 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 ECH1Q13011 328 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ZNF425Q6IV72 752 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ACOT1Q86TX2 421 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CNTD1Q8N815 330 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 HJURPQ8NCD3 748 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 ZBED6CLQ96FA7 236 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 SPIN2AQ99865 258 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SPIN2BQ9BPZ2 258 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ALG2Q9H553 416 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UFSP2Q9NUQ7 469 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SNTG2Q9NY99 539 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 FBXL3Q9UKT7 428 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 GPSM3Q9Y4H4 160 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CASZ1Q86V15 1759 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 DOCK7Q96N67 2140 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UNC13CQ8NB66 2214 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 TBC1D3BA6NDS4 549 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 TOX4O94842 621 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 NRIP1P48552 1158 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 P2RX1P51575 399 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 POLR2JP52435 117 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 IDO2Q6ZQW0 420 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 P4HA3Q7Z4N8 544 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PTGR2Q8N8N7 351 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 GLB1L3Q8NCI6 653 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 ROPN1LQ96C74 230 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CNTNAP3BQ96NU0 1288 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 S100A14Q9HCY8 104 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 GJD2Q9UKL4 321 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms