RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ALKAL1Q6UXT8 129 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ZNF621Q6ZSS3 439 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 NRARPQ7Z6K4 114 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 SVOPQ8N4V2 548 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 OR6K2Q8NGY2 324 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 OR5K1Q8NHB7 308 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 LILRB4Q8NHJ6 448 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TSGA13Q96PP4 275 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 PSD2Q9BQI7 771 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 AGO1Q9UL18 857 aaKnown RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 PSME4Q14997 1843 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 CENPXA8MT69 81 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TLL1O43897 1013 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 BNIP3LO60238 219 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 OPN1SWP03999 348 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 STSP08842 583 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 STC1P52823 247 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 SNRPD2P62316 118 aaKnown RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 NKX3-2P78367 333 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TWF1Q12792 350 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TAPT1Q6NXT6 567 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 LYPD8Q6UX82 237 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TOP6BLQ8N6T0 577 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 DPF3Q92784 378 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 DNASE1L2Q92874 299 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 RHBDF1Q96CC6 855 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ASB2Q96Q27 587 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ZNF300Q96RE9 604 aaPredicted RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TTPALQ9BTX7 342 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 EBPLQ9BY08 206 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 PARVBQ9HBI1 364 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 RNF6Q9Y252 685 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TESMINQ9Y4I5 508 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 NFKBIEO00221 500 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 PCDHGA12O60330 932 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 VPS26AO75436 327 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ITGB1P05556 798 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 THP07101 528 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 MMP2P08253 660 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 MYL3P08590 195 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 RPP38P78345 283 aaKnown RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ARHGEF7Q14155 803 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 GBX1Q14549 363 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 NEK5Q6P3R8 708 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 BHLHA9Q7RTU4 235 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 ZNF548Q8NEK5 533 aaPredicted RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 OR7D4Q8NG98 312 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 GTF2H4Q92759 462 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 VMP1Q96GC9 406 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 IRF2BPLQ9H1B7 796 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 TFB2MQ9H5Q4 396 aaKnown RBP12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 BTBD3Q9Y2F9 522 aa12.15□□□□□ -0.46
SLC38A1-202ENST00000439706 RAMP2O60895 175 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 RPP40O75818 363 aaKnown RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 MSH3P20585 1137 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 CDKN2CP42773 168 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 LINGO4Q6UY18 593 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 CNDP2Q96KP4 475 aaKnown RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ZNF490Q9ULM2 529 aaPredicted RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 MKI67P46013 3256 aaKnown RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 AGAP5A6NIR3 686 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 H3BM21 787 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 VPS4BO75351 444 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 MED26O95402 600 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 BMP1P13497 986 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 CTPS1P17812 591 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 MC4RP32245 332 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 GRK3P35626 688 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 CCL23P55773 120 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ARPC4P59998 168 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 SLC35A2P78381 396 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 SLC14A1Q13336 389 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ATAD3CQ5T2N8 411 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 C11orf74Q86VG3 221 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 STX19Q8N4C7 294 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 TP53I13Q8NBR0 393 aaPredicted RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 PPTC7Q8NI37 304 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 VANGL1Q8TAA9 524 aaPredicted RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 MYEOVQ96EZ4 313 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 NECTIN3Q9NQS3 549 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 C8orf4Q9NR00 106 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 HHLA1C9JL84 531 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 E2F3O00716 465 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ZW10O43264 779 aa12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 CPNE3O75131 537 aaKnown RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 ATXN1LP0C7T5 689 aaKnown RBP12.14□□□□□ -0.47
SLC38A1-202ENST00000439706 HOXD8P13378 290 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms