RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 TCTN3Q6NUS6 607 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 CASC4Q6P4E1 433 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 UNC5DQ6UXZ4 953 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 CDHR3Q6ZTQ4 885 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 OTOAQ7RTW8 1153 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 RAB43Q86YS6 212 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 APLFQ8IW19 511 aaPredicted RBP9.32□□□□□ -0.92
RFC4-207ENST00000433496 GLIS1Q8NBF1 620 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 ZNF778Q96MU6 729 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 FOPNLQ96NB1 174 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 OR2A14Q96R47 310 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 RUFY1Q96T51 708 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 NAP1L3Q99457 506 aaPredicted RBP9.32□□□□□ -0.92
RFC4-207ENST00000433496 CARD6Q9BX69 1037 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 AP1M1Q9BXS5 423 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 NLNQ9BYT8 704 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 EPN3Q9H201 632 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 TXLNGQ9NUQ3 528 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 INTS7Q9NVH2 962 aaKnown RBP9.32□□□□□ -0.92
RFC4-207ENST00000433496 SAMD15Q9P1V8 674 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.32□□□□□ -0.92
RFC4-207ENST00000433496 NDOR1Q9UHB4 597 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 TLK1Q9UKI8 766 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 SLC39A10Q9ULF5 831 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 PPP2R2CQ9Y2T4 447 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 NBASA2RRP1 2371 aa9.32□□□□□ -0.92
RFC4-207ENST00000433496 ARGFXA6NJG6 315 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 ZSCAN9O15535 394 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 ZNF749O43361 778 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 VAPBO95292 243 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 CD63P08962 238 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 TPSB2P20231 275 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 MGAT1P26572 445 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 PKLRP30613 574 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 CXCR5P32302 372 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 RORAP35398 523 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 VPS41P49754 854 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 TERF1P54274 439 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 RRADP55042 308 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 IL10RAQ13651 578 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 SEMA3AQ14563 771 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 NCF4Q15080 339 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 SIX1Q15475 284 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 TPSAB1Q15661 275 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 DEFB110Q30KQ9 67 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 PRAMEF17Q5VTA0 474 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 ZNF534Q76KX8 674 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 LDB1Q86U70 411 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 KRT222Q8N1A0 295 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 SLC38A9Q8NBW4 561 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 MAGEC3Q8TD91 643 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 DENND1AQ8TEH3 1009 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 NRTNQ99748 197 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 NDC1Q9BTX1 674 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 DHRS4Q9BTZ2 278 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 SLC25A23Q9BV35 468 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 AKIRIN1Q9H9L7 192 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 MRM3Q9HC36 420 aaKnown RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 PCMTD2Q9NV79 361 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 SPHK1Q9NYA1 384 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 MARCH4Q9P2E8 410 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 TCFL5Q9UL49 500 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 TTC7AQ9ULT0 858 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 PLCL2Q9UPR0 1127 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 ANKRD12Q6UB98 2062 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 MED13Q9UHV7 2174 aa9.31□□□□□ -0.92
RFC4-207ENST00000433496 RP1L1Q8IWN7 2480 aaPredicted RBP9.31□□□□□ -0.92
RFC4-207ENST00000433496 GOLGA6L10A0A0M3HER8 536 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 IQCF5A8MTL0 148 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 E5RI56 91 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 H3BMM5 538 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 DNAJB5O75953 348 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 TMEM63AO94886 807 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 S1PR4O95977 384 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 NR1D1P20393 614 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 CD9P21926 228 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 RPS3P23396 243 aaKnown RBP eCLIP9.3□□□□□ -0.923e-9■■□□□ 11.4
RFC4-207ENST00000433496 AOAHP28039 575 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 NMBRP28336 390 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 CCNFP41002 786 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 FOLR3P41439 243 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 KCNJ1P48048 391 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 CCL11P51671 97 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 GPS1Q13098 491 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 CHAF1BQ13112 559 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 TRIP13Q15645 432 aaPredicted RBP9.3□□□□□ -0.92
RFC4-207ENST00000433496 KYNUQ16719 465 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 ZNF789Q5FWF6 425 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 C1orf189Q5VU69 101 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 ARMC3Q5W041 872 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 CPZQ66K79 652 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 TLDC1Q6P9B6 456 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 LRRC8BQ6P9F7 803 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 FAM198BQ6UWH4 519 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 ZNF517Q6ZMY9 492 aaPredicted RBP9.3□□□□□ -0.92
RFC4-207ENST00000433496 TAX1BP1Q86VP1 789 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 ATCAYQ86WG3 371 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
RFC4-207ENST00000433496 PROKR1Q8TCW9 393 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms