RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CES2O00748 559 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 AVILO75366 819 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CTSBP07858 339 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 RNF224P0DH78 156 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 PVRP15151 417 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 ACADLP28330 430 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 NMBRP28336 390 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 FOXN2P32314 431 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CD151P48509 253 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CCL11P51671 97 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CSE1LP55060 971 aaKnown RBP12.55□□□□□ -0.4
VRK3-203ENST00000424804 ZIC1Q15915 447 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 LRRC8BQ6P9F7 803 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CDHR3Q6ZTQ4 885 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 LDB1Q86U70 411 aaPredicted RBP12.55□□□□□ -0.4
VRK3-203ENST00000424804 SEC14L1Q92503 715 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 FERD3LQ96RJ6 166 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 NLNQ9BYT8 704 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 IL22Q9GZX6 179 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 XKR8Q9H6D3 395 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 FAM60AQ9NP50 221 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 SAMD15Q9P1V8 674 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 TCFL5Q9UL49 500 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 HEBP2Q9Y5Z4 205 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 SAR1BQ9Y6B6 198 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 BLACEA4D250 179 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 TMEM150CB9EJG8 249 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 KLF7O75840 302 aaPredicted RBP12.54□□□□□ -0.4
VRK3-203ENST00000424804 TMEM63AO94886 807 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 CDH3P22223 829 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 GNLYP22749 145 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 NSG1P42857 185 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 PAFAH1B1P43034 410 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 PREPP48147 710 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 FNTAP49354 379 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 ARL4DP49703 201 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 CDK16Q00536 496 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 KCNJ11Q14654 390 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 SYTL3Q4VX76 610 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 TMTC4Q5T4D3 741 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 LYPLAL1Q5VWZ2 237 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 HIST2H2BCQ6DN03 193 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 NAPRTQ6XQN6 538 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 RBMXL3Q8N7X1 1067 aaKnown RBP12.54□□□□□ -0.4
VRK3-203ENST00000424804 GALNT11Q8NCW6 608 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 LCN9Q8WX39 176 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 CPT1BQ92523 772 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 ELMO1Q92556 727 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 SLC25A23Q9BV35 468 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 NUDT9Q9BW91 350 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 KLHL25Q9H0H3 589 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 SRMSQ9H3Y6 488 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 SOHLH2Q9NX45 425 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 ICKQ9UPZ9 632 aa12.54□□□□□ -0.4
VRK3-203ENST00000424804 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 DOCK10Q96BY6 2186 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 GOLGA8TH3BQL2 631 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 MATN2O00339 956 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 IFRD1O00458 451 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 OR1I1O60431 355 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 CNOT3O75175 753 aaKnown RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 PPARGP37231 505 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 RPA4Q13156 261 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 PRKG2Q13237 762 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 SEMA3AQ14563 771 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 ITIH4Q14624 930 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 PTCHD3Q3KNS1 767 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 PRR30Q53SZ7 412 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 ARMC6Q6NXE6 501 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 SYTL1Q8IYJ3 562 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 CPT1CQ8TCG5 803 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 MFSD3Q96ES6 412 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 OR2A14Q96R47 310 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 MVB12BQ9H7P6 319 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 SYTL2Q9HCH5 934 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 ACSS2Q9NR19 701 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 SPHK1Q9NYA1 384 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 ACTR10Q9NZ32 417 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 RIMKLBQ9ULI2 386 aa12.53□□□□□ -0.4
VRK3-203ENST00000424804 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
VRK3-203ENST00000424804 SLC5A10A0PJK1 596 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 GSAPA4D1B5 854 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 ZNF749O43361 778 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 NDUFS3O75489 264 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 AP2A2O94973 939 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 VAPBO95292 243 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms