RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 MILR1Q7Z6M3 343 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 MFSD4AQ8N468 514 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 LEMD2Q8NC56 503 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 ZFP90Q8TF47 636 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 TRUB1Q8WWH5 349 aaKnown RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 ABCG8Q9H221 673 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 ERVK-18Q9QC07 812 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 DNMT3LQ9UJW3 386 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 TMPRSS11EQ9UL52 423 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 DENND4CQ5VZ89 1909 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 MANBAO00462 879 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 SLC16A6O15403 523 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 UGT2B11O75310 529 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 SERPINA1P01009 418 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 PDYNP01213 254 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 IRF1P10914 325 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 CACNG1Q06432 222 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 DOC2BQ14184 412 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 SGO1Q5FBB7 561 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 CPZQ66K79 652 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 CES5AQ6NT32 575 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 C16orf87Q6PH81 154 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 PRR23BQ6ZRT6 265 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 EFL1Q7Z2Z2 1120 aaKnown RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 TSPAN33Q86UF1 283 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 APCDD1Q8J025 514 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 C8orf59Q8N0T1 100 aaPredicted RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 PYCR2Q96C36 320 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 YIPF6Q96EC8 236 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 ALPK1Q96QP1 1244 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 COMMD8Q9NX08 183 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 BLOC1S6Q9UL45 172 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 ELOVL7A1L3X0 281 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 OR6C75A6NL08 312 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 A8MX80 341 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 E5RI56 91 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 PRMT5O14744 637 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 DIRAS1O95057 198 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 SLC25A14O95258 325 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 CLDN7O95471 211 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 BPIP17213 487 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ATP5C1P36542 298 aaKnown RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 BCAP31P51572 246 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 CHRNB3Q05901 458 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 TUBA3CQ13748 450 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 FUT10Q6P4F1 479 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 GCNT7Q6ZNI0 430 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 RNF165Q6ZSG1 346 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 GALNT5Q7Z7M9 940 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ZDHHC13Q8IUH4 622 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 MICU2Q8IYU8 434 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 PARP8Q8N3A8 854 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 GFM2Q969S9 779 aaKnown RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 SIGLEC11Q96RL6 698 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 KLQ9UEF7 1012 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ZNF490Q9ULM2 529 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 PKP3Q9Y446 797 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 SCN2BO60939 215 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 CLDN11O75508 207 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 PRAMEF1O95521 474 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ALDH4A1P30038 563 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 FMO3P31513 532 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ILF2Q12905 390 aaKnown RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 NFATC2Q13469 925 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 NR1D2Q14995 579 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 SF1Q15637 639 aaKnown RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 ANKRD13BQ86YJ7 626 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 VRK3Q8IV63 474 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 RAB2BQ8WUD1 216 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 UBTD2Q8WUN7 234 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 PPP1R14BQ96C90 147 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 THUMPD3Q9BV44 507 aaKnown RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 NTMT1Q9BV86 223 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 PCDH12Q9NPG4 1184 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ASIC5Q9NY37 505 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 VPS51Q9UID3 782 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 MYOFQ9NZM1 2061 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 C1orf232A0A0U1RR37 186 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 OTCP00480 354 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 PORP16435 677 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 ITIH1P19827 911 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 MAP4P27816 1152 aaKnown RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 CST5P28325 142 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 ZNF157P51786 506 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 WNT3P56703 355 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 GABARAPL2P60520 117 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 MVKQ03426 396 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 MAPKAPK3Q16644 382 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 CATSPEREQ5SY80 951 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ZBTB8BQ8NAP8 495 aaPredicted RBP9.63□□□□□ -0.87
SS18-203ENST00000415083 APH1BQ8WW43 257 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 ZNF566Q969W8 418 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 APIPQ96GX9 242 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 TMEM184CQ9NVA4 438 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 VPS4AQ9UN37 437 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 MAN2B2Q9Y2E5 1009 aa9.63□□□□□ -0.87
SS18-203ENST00000415083 XIRP2A4UGR9 3374 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms