RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 TBC1D3EA0A087X179 549 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3KA0A087X1G2 549 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3FA6NER0 549 aaPredicted RBP22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3LB9A6J9 549 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3HP0C7X1 549 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 SRFP11831 508 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 IDO1P14902 403 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 NDUFV2P19404 249 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 HNRNPH1P31943 449 aaKnown RBP22.58■■□□□ 1.2
CDH23-206ENST00000398842 ERVK-8P63133 956 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 RPA4Q13156 261 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 KIF19Q2TAC6 998 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3GQ6DHY5 549 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3CQ6IPX1 549 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 AGTRAPQ6RW13 159 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 DEFB107AQ8IZN7 70 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 TBC1D3Q8IZP1 549 aaPredicted RBP22.58■■□□□ 1.2
CDH23-206ENST00000398842 MIER2Q8N344 545 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 L3MBTL4Q8NA19 623 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 KYQ8NBH2 561 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 C1QTNF7Q9BXJ2 289 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 ACTR8Q9H981 624 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 EFCAB1Q9HAE3 211 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 PHPT1Q9NRX4 125 aaPredicted RBP22.58■■□□□ 1.2
CDH23-206ENST00000398842 AIG1Q9NVV5 245 aa22.58■■□□□ 1.2
CDH23-206ENST00000398842 KCNE1BA0A087WTH5 132 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 MANBAO00462 879 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 FFAR3O14843 346 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 GPR42O15529 346 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 SNRPB2P08579 225 aaKnown RBP22.57■■□□□ 1.2
CDH23-206ENST00000398842 MYCLP1P12525 358 aaPredicted RBP22.57■■□□□ 1.2
CDH23-206ENST00000398842 ITPKAP23677 461 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 IMPA1P29218 277 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 IGFALSP35858 605 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 DIO3P55073 304 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 DSELQ8IZU8 1212 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 OR56A3Q8NH54 315 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 ASB12Q8WXK4 309 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 USP7Q93009 1102 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 HBEGFQ99075 208 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 PRDM6Q9NQX0 595 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 INTS7Q9NVH2 962 aaKnown RBP22.57■■□□□ 1.2
CDH23-206ENST00000398842 KLQ9UEF7 1012 aa22.57■■□□□ 1.2
CDH23-206ENST00000398842 LSM1O15116 133 aaKnown RBP22.56■■□□□ 1.2
CDH23-206ENST00000398842 PRAMEF4O60810 478 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 SLC16A8O95907 504 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 CD72P21854 359 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 PPP2CBP62714 309 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 PPP2CAP67775 309 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 TFF2Q03403 129 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 STX5Q13190 355 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 ATP6AP1LQ52LC2 224 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 PRAMEF9Q5VWM5 478 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 PGM2L1Q6PCE3 622 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 TRIM46Q7Z4K8 759 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 ZDHHC5Q9C0B5 715 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 BRINP2Q9C0B6 783 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 FARSBQ9NSD9 589 aaKnown RBP22.56■■□□□ 1.2
CDH23-206ENST00000398842 SLC7A8Q9UHI5 535 aa22.56■■□□□ 1.2
CDH23-206ENST00000398842 FBP2O00757 339 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 KMOO15229 486 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 ULK1O75385 1050 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 ACADMP11310 421 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 SFSWAPQ12872 951 aaKnown RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 GRIK2Q13002 908 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 TDGQ13569 410 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 ZRSR2Q15696 482 aaKnown RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 SNCBQ16143 134 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 C16orf89Q6UX73 402 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 FAM124AQ86V42 546 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 THOC6Q86W42 341 aaKnown RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 NPAS2Q99743 824 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 SLC25A23Q9BV35 468 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 CD93Q9NPY3 652 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 TM7SF3Q9NS93 570 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 CIDEBQ9UHD4 219 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 SLC28A1O00337 649 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 MAT2AP31153 395 aaKnown RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 TBL3Q12788 808 aaKnown RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 NAE1Q13564 534 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 KIAA1324Q6UXG2 1013 aaKnown RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 UNC5DQ6UXZ4 953 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 PDZD3Q86UT5 571 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 MYLK4Q86YV6 388 aaPredicted RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 WDR60Q8WVS4 1066 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 ZNHIT2Q9UHR6 403 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 ZNF490Q9ULM2 529 aaPredicted RBP22.55■■□□□ 1.2
CDH23-206ENST00000398842 COL6A3P12111 3177 aa22.55■■□□□ 1.2
CDH23-206ENST00000398842 FUCA1P04066 466 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 GABRG2P18507 467 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 EMX2Q04743 252 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 RPS6KA2Q15349 733 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 NR6A1Q15406 480 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 CPSF6Q16630 551 aaKnown RBP eCLIP22.54■■□□□ 1.2
CDH23-206ENST00000398842 LEXMQ3ZCV2 418 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 METRNLQ641Q3 311 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 PTCRAQ6ISU1 281 aaPredicted RBP22.54■■□□□ 1.2
CDH23-206ENST00000398842 FNDC5Q8NAU1 212 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 MAGEB10Q96LZ2 347 aaPredicted RBP22.54■■□□□ 1.2
CDH23-206ENST00000398842 FZD3Q9NPG1 666 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms