RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 C6orf136Q5SQH8 315 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 PTCRAQ6ISU1 281 aaPredicted RBP13.06□□□□□ -0.32
CLIC1-209ENST00000395892 PGM2L1Q6PCE3 622 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 DOK6Q6PKX4 331 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 AGTRAPQ6RW13 159 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 LRRTM4Q86VH4 590 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 AMZ2Q86W34 360 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 USP7Q93009 1102 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 PYCR2Q96C36 320 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 TUBGCP3Q96CW5 907 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 OR4K3Q96R72 315 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 MMADHCQ9H3L0 296 aaPredicted RBP13.06□□□□□ -0.32
CLIC1-209ENST00000395892 PHPT1Q9NRX4 125 aaPredicted RBP13.06□□□□□ -0.32
CLIC1-209ENST00000395892 DNAJC11Q9NVH1 559 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 ANGPTL3Q9Y5C1 460 aa13.06□□□□□ -0.32
CLIC1-209ENST00000395892 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 MEI4A8MW99 385 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 PSMD12O00232 456 aaPredicted RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 FBP2O00757 339 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 KMOO15229 486 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 PEX11AO75192 247 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 CLDN9O95484 217 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 CHEK2O96017 543 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 IGLV3-19P01714 112 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 MYCLP1P12525 358 aaPredicted RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 IL9P15248 144 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 MAP4P27816 1152 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 MAT2AP31153 395 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 PGM1P36871 562 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 IRX1P78414 480 aaPredicted RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 DMPKQ09013 629 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 GRIK2Q13002 908 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 E2F2Q14209 437 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 GAS6Q14393 721 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 GSTA3Q16772 222 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 PLA2G4EQ3MJ16 856 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 AGKQ53H12 422 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 CAPRIN2Q6IMN6 1127 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 PAOXQ6QHF9 649 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 Q6ZS52 159 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 GK5Q6ZS86 529 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 FAM124AQ86V42 546 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 THOC6Q86W42 341 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 TRIM69Q86WT6 500 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 ATL1Q8WXF7 558 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 BMFQ96LC9 184 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 SLC29A3Q9BZD2 475 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 SDR39U1Q9NRG7 319 aaPredicted RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 FARSBQ9NSD9 589 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 MRGBPQ9NV56 204 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 AIG1Q9NVV5 245 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 USP36Q9P275 1121 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 ZNHIT2Q9UHR6 403 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 NDRG2Q9UN36 371 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 DUSP12Q9UNI6 340 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 BOLA1Q9Y3E2 137 aa13.05□□□□□ -0.32
CLIC1-209ENST00000395892 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.05□□□□□ -0.32
CLIC1-209ENST00000395892 TCRBV21S2A2A0A5A6 115 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 GIPC1O14908 333 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
CLIC1-209ENST00000395892 SLC31A1O15431 190 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 SLC16A8O95907 504 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 ITPKAP23677 461 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 CASP2P42575 452 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 DIO3P55073 304 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 EMX2Q04743 252 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 SFSWAPQ12872 951 aaKnown RBP13.04□□□□□ -0.32
CLIC1-209ENST00000395892 NAE1Q13564 534 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 CUL3Q13618 768 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 FASTKQ14296 549 aaKnown RBP13.04□□□□□ -0.32
CLIC1-209ENST00000395892 DNAL1Q4LDG9 190 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 IL27RAQ6UWB1 636 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
CLIC1-209ENST00000395892 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 SNX31Q8N9S9 440 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 PHC3Q8NDX5 983 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 OR9A1PQ8NGU1 263 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 OR2T34Q8NGX1 318 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 ZNF480Q8WV37 535 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 FOPNLQ96NB1 174 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
CLIC1-209ENST00000395892 C1QTNF7Q9BXJ2 289 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 BRINP2Q9C0B6 783 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
CLIC1-209ENST00000395892 RMI1Q9H9A7 625 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 EBF2Q9HAK2 575 aa13.04□□□□□ -0.32
CLIC1-209ENST00000395892 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms