RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 TRIM15Q9C019 465 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 POLR1EQ9GZS1 481 aaKnown RBP11.31□□□□□ -0.6
CCDC57-205ENST00000392346 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-205ENST00000392346 PNMA8BQ9ULN7 279 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-205ENST00000392346 FUOMA2VDF0 154 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 RPS17P08708 135 aaKnown RBP11.31□□□□□ -0.6
CCDC57-205ENST00000392346 PFKLP17858 780 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 DCKP27707 260 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 HTR1BP28222 390 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 B2MP61769 119 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 RAC1P63000 192 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 BNIP2Q12982 314 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 SERINC3Q13530 473 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 FAM174BQ3ZCQ3 159 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 SPANXN4Q5MJ08 99 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 LAIR1Q6GTX8 287 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 GCNT7Q6ZNI0 430 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 IGFN1Q86VF2 1251 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 OR4F6Q8NGB9 312 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 STAG3L4Q8TBR4 150 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 KIAA1191Q96A73 305 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 GKN1Q9NS71 199 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 TBC1D23Q9NUY8 699 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 VNN3Q9NY84 501 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 TAS2R13Q9NYV9 303 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 MALT1Q9UDY8 824 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 ZMIZ1Q9ULJ6 1067 aa11.31□□□□□ -0.6
CCDC57-205ENST00000392346 RANBP2P49792 3224 aaKnown RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 MYO7AQ13402 2215 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 BBIP1A8MTZ0 92 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 H0YJX3 145 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 PRKD3O94806 890 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 SLC2A4P14672 509 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 RHOQP17081 205 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 CCNA2P20248 432 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 RAD23AP54725 363 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 PHEXP78562 749 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 ZXDBP98169 803 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 NFKB2Q00653 900 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 KCNAB2Q13303 367 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 SF1Q15637 639 aaKnown RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 CRTC1Q6UUV9 634 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 CYP20A1Q6UW02 462 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 GPRIN3Q6ZVF9 776 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 DTX3Q8N9I9 347 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 PKD2L2Q9NZM6 624 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 AFF4Q9UHB7 1163 aaKnown RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 NINQ8N4C6 2090 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 E5RI56 91 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 GNGT2O14610 69 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 SNX4O95219 450 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 GJB5O95377 273 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 ALPLP05186 524 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 FGF4P08620 206 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 INHBBP09529 407 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 THRBP10828 461 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 SYN1P17600 705 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 CASP9P55211 416 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 RAD51Q06609 339 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 CD47Q08722 323 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 GALNT1Q10472 559 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 ATXN7L2Q5T6C5 722 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 GALNT13Q8IUC8 556 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 NDNFQ8TB73 568 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 CD200R1Q8TD46 325 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 ZNF599Q96NL3 588 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 MBOAT4Q96T53 435 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 TM6SF2Q9BZW4 377 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 BRINP2Q9C0B6 783 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 TMEM248Q9NWD8 314 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 ZFP37Q9Y6Q3 630 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-205ENST00000392346 MICAL3Q7RTP6 2002 aa11.3□□□□□ -0.6
CCDC57-205ENST00000392346 EEDO75530 441 aaKnown RBP11.29□□□□□ -0.6
CCDC57-205ENST00000392346 MATN4O95460 622 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 ESRRBO95718 433 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 BCL10O95999 233 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 CST1P01037 141 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 PRLP01236 227 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 FTH1P02794 183 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 VAMP1P23763 118 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-205ENST00000392346 MAPK9P45984 424 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 RELAQ04206 551 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 TWF1Q12792 350 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 SLC14A1Q13336 389 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 SPIDRQ14159 915 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 SSPNQ14714 243 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 LRRC73Q5JTD7 316 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 GPSM1Q86YR5 675 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 HID1Q8IV36 788 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 THEM5Q8N1Q8 247 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 OR6C4Q8NGE1 309 aa11.29□□□□□ -0.6
CCDC57-205ENST00000392346 PNPT1Q8TCS8 783 aaKnown RBP11.29□□□□□ -0.6
CCDC57-205ENST00000392346 RPL3LQ92901 407 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms