RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MTX3Q5HYI7 312 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF648Q5T619 568 aaPredicted RBP13.95□□□□□ -0.18
CLCN4-201ENST00000380829 SERPINA13PQ6UXR4 307 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 TMEM26Q6ZUK4 368 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 RETREG3Q86VR2 466 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 SLC15A4Q8N697 577 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 METTL6Q8TCB7 284 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 SKA2Q8WVK7 121 aaPredicted RBP13.95□□□□□ -0.18
CLCN4-201ENST00000380829 NXPE3Q969Y0 559 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF597Q96LX8 424 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 CIB1Q99828 191 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 IL1RL2Q9HB29 575 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 SDR39U1Q9NRG7 319 aaPredicted RBP13.95□□□□□ -0.18
CLCN4-201ENST00000380829 DPP7Q9UHL4 492 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 ZMYM5Q9UJ78 669 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 SLC8A2Q9UPR5 921 aa13.95□□□□□ -0.18
CLCN4-201ENST00000380829 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 CNOT3O75175 753 aaKnown RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 VPS4BO75351 444 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 GNAO1P09471 354 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 OR56A5P0C7T3 313 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 PRR35P0CG20 571 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF30P17039 623 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 CAPN3P20807 821 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 XPAP23025 273 aaPredicted RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 SLC6A11P48066 632 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 METAP1P53582 386 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 FAM78AQ5JUQ0 283 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ZDHHC20Q5W0Z9 365 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ULK4Q96C45 1275 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 RHBDF1Q96CC6 855 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 LRCH3Q96II8 777 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 FAM83DQ9H4H8 585 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ITM2BQ9Y287 266 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 NOX1Q9Y5S8 564 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 BMP10O95393 424 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ADH1CP00326 375 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ATP1B2P14415 290 aaPredicted RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 RPS3AP61247 264 aaKnown RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ESRRGP62508 458 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 TRAF3Q13114 568 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 CRY1Q16526 586 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 IL27RAQ6UWB1 636 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 EFL1Q7Z2Z2 1120 aaKnown RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 VRK3Q8IV63 474 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF786Q8N393 782 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 BEND7Q8N7W2 519 aaPredicted RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 ITPKCQ96DU7 683 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 TEX37Q96LM6 180 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 MCOLN1Q9GZU1 580 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 CLK4Q9HAZ1 481 aaKnown RBP13.94□□□□□ -0.18
CLCN4-201ENST00000380829 FAM8A1Q9UBU6 413 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 GPR45Q9Y5Y3 372 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 SZT2Q5T011 3432 aa13.94□□□□□ -0.18
CLCN4-201ENST00000380829 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 A8MU76 341 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 PRRT4C9JH25 899 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 SEC24DO94855 1032 aaPredicted RBP13.93□□□□□ -0.18
CLCN4-201ENST00000380829 HLA-EP13747 358 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 PBX2P40425 430 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 PIK3CGP48736 1102 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 KCNC4Q03721 635 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 ITGADQ13349 1161 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 GRIN2CQ14957 1233 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 RGS21Q2M5E4 152 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF805Q5CZA5 627 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 DEPDC1Q5TB30 811 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 Q6ZSR9 355 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 SFTPA1Q8IWL2 248 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 NPAS3Q8IXF0 933 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 VN1R2Q8NFZ6 395 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 TAMM41Q96BW9 452 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 RIOK2Q9BVS4 552 aaKnown RBP13.93□□□□□ -0.18
CLCN4-201ENST00000380829 TUBA8Q9NY65 449 aaPredicted RBP13.93□□□□□ -0.18
CLCN4-201ENST00000380829 OPTCQ9UBM4 332 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 SARDHQ9UL12 918 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 CDH7Q9ULB5 785 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 YBX2Q9Y2T7 364 aaKnown RBP13.93□□□□□ -0.18
CLCN4-201ENST00000380829 ANGPTL3Q9Y5C1 460 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 KRT87PA6NCN2 255 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 KPNA3O00505 521 aaPredicted RBP13.93□□□□□ -0.18
CLCN4-201ENST00000380829 TRIM38O00635 465 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 AQP9O43315 295 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 OTCP00480 354 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 AOAHP28039 575 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 TUBA4AP68366 448 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 PMS2P3Q13401 168 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 SULT1C3Q6IMI6 304 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 MILR1Q7Z6M3 343 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 FNDC5Q8NAU1 212 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 BPIFB1Q8TDL5 484 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 OSBPL11Q9BXB4 747 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 CD244Q9BZW8 370 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 NDEL1Q9GZM8 345 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 PCDHAC1Q9H158 963 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms