RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 SKA2Q8WVK7 121 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-203ENST00000376490 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
CLCN6-203ENST00000376490 MENTQ9BUN1 341 aa13.79□□□□□ -0.2
CLCN6-203ENST00000376490 TWSG1Q9GZX9 223 aa13.79□□□□□ -0.2
CLCN6-203ENST00000376490 FAM60AQ9NP50 221 aa13.79□□□□□ -0.2
CLCN6-203ENST00000376490 FBXO6Q9NRD1 293 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-203ENST00000376490 C20orf96Q9NUD7 363 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-203ENST00000376490 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
CLCN6-203ENST00000376490 CROTQ9UKG9 612 aa13.79□□□□□ -0.2
CLCN6-203ENST00000376490 RUVBL2Q9Y230 463 aaKnown RBP13.79□□□□□ -0.2
CLCN6-203ENST00000376490 MDC1Q14676 2089 aaKnown RBP13.79□□□□□ -0.2
CLCN6-203ENST00000376490 ZNF891A8MT65 544 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-203ENST00000376490 TMEM150CB9EJG8 249 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 H3BMM5 538 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 TERTO14746 1132 aaKnown RBP13.78□□□□□ -0.2
CLCN6-203ENST00000376490 MAP3K7O43318 606 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 KDM1AO60341 852 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 SCRG1O75711 98 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 C1QL1O75973 258 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 MT-ND3P03897 115 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 ITGB2P05107 769 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 TCN2P20062 427 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 CD9P21926 228 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 PEBP1P30086 187 aaKnown RBP13.78□□□□□ -0.2
CLCN6-203ENST00000376490 PKLRP30613 574 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 RAB28P51157 221 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 DR1Q01658 176 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 ZIC1Q15915 447 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 HSP90AA5PQ58FG0 334 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 ZNF549Q6P9A3 640 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 CDHR3Q6ZTQ4 885 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 HOOK3Q86VS8 718 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 TMEM126BQ8IUX1 230 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 IGDCC3Q8IVU1 814 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 DCUN1D3Q8IWE4 304 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 FAM20CQ8IXL6 584 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 LINC01555Q8NAE3 123 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 OR8K5Q8NH50 307 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 OR1L3Q8NH93 324 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 PWWP2AQ96N64 755 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 EBNA1BP2Q99848 306 aaKnown RBP13.78□□□□□ -0.2
CLCN6-203ENST00000376490 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 EFHD1Q9BUP0 239 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 LHX9Q9NQ69 397 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 LATS2Q9NRM7 1088 aa13.78□□□□□ -0.2
CLCN6-203ENST00000376490 INTS10Q9NVR2 710 aaKnown RBP13.78□□□□□ -0.2
CLCN6-203ENST00000376490 KRT87PA6NCN2 255 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 COL6A6A6NMZ7 2263 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 TTI1O43156 1089 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 HCRTR1O43613 425 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 KATNA1O75449 491 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 HAUS5O94927 633 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 C1orf105O95561 183 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 RPN2P04844 631 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 PRKAR1AP10644 381 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 SLC1A2P43004 574 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 BDKRB1P46663 353 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 GBX1Q14549 363 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 KIR2DS3Q14952 304 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 BBS9Q3SYG4 887 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 ACSBG2Q5FVE4 666 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 HP1BP3Q5SSJ5 553 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-203ENST00000376490 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 C16orf46Q6P387 395 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 TTC23LQ6PF05 361 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 CNSTQ6PJW8 725 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 SYDE1Q6ZW31 735 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-203ENST00000376490 ZBTB2Q8N680 514 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLCN6-203ENST00000376490 CT55Q8WUE5 264 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 SLC30A3Q99726 388 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 ARHGAP9Q9BRR9 750 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 FANCEQ9HB96 536 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 IARS2Q9NSE4 1012 aaKnown RBP13.77□□□□□ -0.21
CLCN6-203ENST00000376490 SERTAD3Q9UJW9 196 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 SLC39A10Q9ULF5 831 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 KLHL20Q9Y2M5 609 aa13.77□□□□□ -0.21
CLCN6-203ENST00000376490 A0A0J9YY10 115 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 E5RI56 91 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 CCDC188H7C350 402 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MATN4O95460 622 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MSL3P1P0C860 447 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 ERVK-10P10266 1014 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 PGAM1P18669 254 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 OAS2P29728 719 aaKnown RBP13.76□□□□□ -0.21
CLCN6-203ENST00000376490 GABRA4P48169 554 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 CLCN7P51798 805 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MRPS25P82663 173 aaKnown RBP13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MPP1Q00013 466 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 GPS2Q13227 327 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 COL9A2Q14055 689 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-203ENST00000376490 SLC5A12Q1EHB4 618 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 KLHL38Q2WGJ6 581 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 HIBCHQ6NVY1 386 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms