RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SNRPB2P08579 225 aaKnown RBP11.26□□□□□ -0.61
SCAF11-201ENST00000266589 NDUFV2P19404 249 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 IMPA1P29218 277 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 PPP2CBP62714 309 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 PPP2CAP67775 309 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 TBL3Q12788 808 aaKnown RBP11.26□□□□□ -0.61
SCAF11-201ENST00000266589 STX5Q13190 355 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 ART3Q13508 389 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 RPS6KA2Q15349 733 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 NR6A1Q15406 480 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 SLC44A4Q53GD3 710 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 C6orf136Q5SQH8 315 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 C16orf89Q6UX73 402 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 USP30Q70CQ3 517 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 DSELQ8IZU8 1212 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 SFRP1Q8N474 314 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 FNDC5Q8NAU1 212 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 MED8Q96G25 268 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 MSANTD3Q96H12 275 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 SLC25A23Q9BV35 468 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 FZD3Q9NPG1 666 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 CD93Q9NPY3 652 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 SDR39U1Q9NRG7 319 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-201ENST00000266589 FARSBQ9NSD9 589 aaKnown RBP11.26□□□□□ -0.61
SCAF11-201ENST00000266589 AIG1Q9NVV5 245 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 SLC23A2Q9UGH3 650 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 SLC7A8Q9UHI5 535 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 ZNHIT2Q9UHR6 403 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 ZNF490Q9ULM2 529 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-201ENST00000266589 MMP17Q9ULZ9 603 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 NUMA1Q14980 2115 aa11.26□□□□□ -0.61
SCAF11-201ENST00000266589 TCRBV21S2A2A0A5A6 115 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 MANBAO00462 879 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 LSM1O15116 133 aaKnown RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 ENTPD5O75356 428 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 ULK1O75385 1050 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 CIB2O75838 187 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 MYCLP1P12525 358 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 IGFALSP35858 605 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 NAE1Q13564 534 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 KPNB1Q14974 876 aaKnown RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 CPSF6Q16630 551 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■■□ 25
SCAF11-201ENST00000266589 MAP7D1Q3KQU3 841 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 MMEL1Q495T6 779 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 GGTA1PQ4G0N0 100 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 SGO1Q5FBB7 561 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 REP15Q6BDI9 236 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 RNF165Q6ZSG1 346 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 THOC6Q86W42 341 aaKnown RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 FUNDC1Q8IVP5 155 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 OXR1Q8N573 874 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 FBXO15Q8NCQ5 510 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 PPFIBP2Q8ND30 876 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 WDR60Q8WVS4 1066 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 MYOCQ99972 504 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 OR52A5Q9H2C5 316 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 TM7SF3Q9NS93 570 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
SCAF11-201ENST00000266589 GPR45Q9Y5Y3 372 aa11.25□□□□□ -0.61
SCAF11-201ENST00000266589 GPR89AB7ZAQ6 455 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 NR5A2O00482 541 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 FBP2O00757 339 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 KMOO15229 486 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SLC31A1O15431 190 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 RGS14O43566 566 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 PDE5AO76074 875 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 KRT6AP02538 564 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 KRT6BP04259 564 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 GPR89BP0CG08 455 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SRFP11831 508 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 ACADLP28330 430 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 HALP42357 657 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 KRT6CP48668 564 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 IRX1P78414 480 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 RPA4Q13156 261 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SMAD2Q15796 467 aaKnown RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 PDZD3Q86UT5 571 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 HOMEZQ8IX15 550 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 L3MBTL4Q8NA19 623 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 USP7Q93009 1102 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 ZDHHC5Q9C0B5 715 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 NDE1Q9NXR1 346 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 CCL27Q9Y4X3 112 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 KCNE1BA0A087WTH5 132 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 C9JVG2 144 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SLC28A1O00337 649 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 C7P10643 843 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 GABRG2P18507 467 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 MRPL19P49406 292 aaKnown RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 HMGCS1Q01581 520 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 CHIT1Q13231 466 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 IMPG1Q17R60 797 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 AP5B1Q2VPB7 878 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms