RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 FEM1AQ9BSK4 669 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 TRIM8Q9BZR9 551 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 CD244Q9BZW8 370 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 TTYH1Q9H313 450 aaPredicted RBP24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 USE1Q9NZ43 259 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 ANGPTL3Q9Y5C1 460 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 PCDHB9Q9Y5E1 797 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 OR51B4Q9Y5P0 310 aa24.36■■□□□ 1.49
RUNDC3A-201ENST00000225441 TMEM265A0A087WTH1 108 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 SNAP29O95721 258 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 THRBP10828 461 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 HNRNPFP52597 415 aaKnown RBP24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 ABRAXAS2Q15018 415 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 OR2T12Q8NG77 320 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 CDK15Q96Q40 435 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 CIPCQ9C0C6 399 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 MAGIXQ9H6Y5 334 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 OPTCQ9UBM4 332 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 POLR3HQ9Y535 204 aaPredicted RBP24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 H0Y626 953 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 EIF3FO00303 357 aaPredicted RBP24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 ALPLP05186 524 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 CBSLP0DN79 551 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 SLC2A4P14672 509 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 CBSP35520 551 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 ARL1P40616 181 aaPredicted RBP24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 GNPDA1P46926 289 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 TTLL9Q3SXZ7 439 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 RFTN2Q52LD8 501 aaPredicted RBP24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 MPP7Q5T2T1 576 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 CELF5Q8N6W0 485 aaKnown RBP24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 POLR1BQ9H9Y6 1135 aa24.35■■□□□ 1.49
RUNDC3A-201ENST00000225441 CDH23Q9H251 3354 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 C16orf96A6NNT2 1141 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 TAPBPO15533 448 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 SOCS5O75159 536 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 SEC24DO94855 1032 aaPredicted RBP24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 TMBIM6P55061 237 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 ATG9BQ674R7 924 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 TPGS1Q6ZTW0 290 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 RALGPS2Q86X27 583 aaPredicted RBP24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 ZDHHC13Q8IUH4 622 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 GTF2H4Q92759 462 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 TMBIM1Q969X1 311 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 NRBF2Q96F24 287 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 MAGED4Q96JG8 741 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 DPY30Q9C005 99 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 HPS4Q9NQG7 708 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 CLEC1BQ9P126 229 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 IFT80Q9P2H3 777 aaPredicted RBP24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 TBC1D14Q9P2M4 693 aa24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 NUP210Q8TEM1 1887 aaPredicted RBP24.34■■□□□ 1.49
RUNDC3A-201ENST00000225441 CXorf51AA0A1B0GTR3 108 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 K7EPI3 171 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 GSTA4O15217 222 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 NOL3O60936 208 aaKnown RBP24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 RETP07949 1114 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 PMS2P3Q13401 168 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 GRIN2CQ14957 1233 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 RAB39AQ14964 217 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 MAPKAPK3Q16644 382 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 KCTD8Q6ZWB6 473 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 GET4Q7L5D6 327 aaPredicted RBP24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 ZBTB2Q8N680 514 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 FGF13Q92913 245 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 BHMTQ93088 406 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 ZFYVE1Q9HBF4 777 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 EBF1Q9UH73 591 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 MTCH2Q9Y6C9 303 aa24.33■■□□□ 1.49
RUNDC3A-201ENST00000225441 IQCF5A8MTL0 148 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 ULK1O75385 1050 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 PRAMEF1O95521 474 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 CYP4F3Q08477 520 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 NFATC2Q13469 925 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 TOP3AQ13472 1001 aaPredicted RBP24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 CDH18Q13634 790 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 GPRC6AQ5T6X5 926 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 BROXQ5VW32 411 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 RETSATQ6NUM9 610 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 THAP5Q7Z6K1 395 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 ZNF548Q8NEK5 533 aaPredicted RBP24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 PJA1Q8NG27 643 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 HDAC2Q92769 488 aaKnown RBP24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 RHBDF1Q96CC6 855 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 CLMPQ9H6B4 373 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 COLQQ9Y215 455 aaPredicted RBP24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 NEUROG3Q9Y4Z2 214 aa24.33■■□□□ 1.48
RUNDC3A-201ENST00000225441 MYO9BQ13459 2157 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 A0A0J9YVX5 310 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 ERN1O75460 977 aaKnown RBP24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 DNAJB5O75953 348 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 ACRV1P26436 265 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 MTPNP58546 118 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 GABARAPL2P60520 117 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 SELPLGQ14242 412 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 RUNDC3AQ59EK9 446 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 FAM78AQ5JUQ0 283 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 GRAMD4Q6IC98 578 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 LINGO4Q6UY18 593 aa24.32■■□□□ 1.48
RUNDC3A-201ENST00000225441 USP7Q93009 1102 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms