RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Calcoco2A2A6M5 331 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Olfr1160A2AVT0 319 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 St3gal5O88829 414 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Tacr2P30549 384 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Stmn4P63042 189 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Atp2a3Q64518 1038 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Sort1Q6PHU5 825 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Stk32aQ8BGW6 398 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ints10Q8K2A7 710 aaKnown RBP29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Pcdhga6Q91XY2 932 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Grk2Q99MK8 689 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Nipa2Q9JJC8 359 aa29.63■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Tmco2P0C1V4 183 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Phxr1P15973 60 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 ptchd1Q14B62 888 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Mif4gdQ3UBZ5 222 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ifi47Q61635 420 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ift52Q62559 426 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 DdiasQ6NZG4 898 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ube2r2Q6ZWZ2 238 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Wasf2Q8BH43 497 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ccm2Q8K2Y9 453 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Adgrl4Q923X1 739 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Isca2Q9DCB8 154 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Vnn3Q9QZ25 500 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Krt71Q9R0H5 524 aa29.62■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Igkv6-32A0A140T8N9 115 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 6330409D20RikA2AK85 162 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Mkrn2osD3Z393 217 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Gm3187M0QWW3 260 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Capn5O08688 640 aaKnown RBP29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Foxd2O35392 492 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Slc32a1O35633 525 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Tyrp1P07147 537 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Gal3st3P61315 431 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Prss38Q3UKY7 322 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ankrd34bQ3UUF8 508 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Olfr1418Q7TQS3 318 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 PeloQ80X73 385 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ipo13Q8K0C1 963 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Rbmx2Q8R0F5 326 aaKnown RBP29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Thbs4Q9Z1T2 963 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Fem1aaQ9Z2G1 654 aa29.61■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Vmn2r104E9Q2J5 860 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 FpgtG5E8F4 590 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 IlkO55222 452 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Tgfbr3O88393 850 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Scg5P12961 212 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Icam1P13597 537 aaKnown RBP29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Cpt1aP97742 773 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 E330014E10RikQ3UL33 481 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Gm5460Q3UQ97 254 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 D5Ertd577eQ499F0 481 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 TsnQ62348 228 aaKnown RBP29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Sh3gl2Q62420 352 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 XpaQ64267 272 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Znf451Q8C0P7 1056 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Dcun1d3Q8K0V2 304 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Olfr1311Q8VET0 312 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Rgs10Q9CQE5 181 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Gm29776A0A286YEC0 699 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Vmn2r34E9PVI0 852 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Vmn2r37F8VQD3 802 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Vmn2r4K7N784 913 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Hs3st1O35310 311 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Lbx1P52955 282 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Atxn1P54254 791 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Cct5P80316 541 aaKnown RBP29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Rbm15Q0VBL3 962 aaKnown RBP29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Zfp36l3Q5ISE2 725 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Pik3r3Q64143 461 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ca4Q64444 305 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Fam177a1Q8BR63 207 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Fbxl8Q8CIG9 374 aa29.6■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Kiaa1522A2A7S8 1013 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Apol11bE9PUZ0 337 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Acbd4E9Q289 327 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Sec22bO08547 215 aaKnown RBP29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Zfp235Q499D5 702 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Gm11992Q5SS90 291 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Trpm4Q7TN37 1213 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Srrm3Q80WV7 648 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Calcoco1Q8CGU1 691 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ms4a10Q99N03 267 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Nudt21Q9CQF3 227 aaKnown RBP29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Gm26657Q9CVR1 127 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Il17bQ9QXT6 180 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 NsdhlQ9R1J0 362 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Frem2Q6NVD0 3160 aa29.59■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Wnk2Q3UH66 2149 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Zfpm1O35615 995 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Eno2P17183 434 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Myf5P24699 255 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 P2ry2P35383 373 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Limk1P53668 647 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ripk2P58801 539 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Meaf6Q2VPQ9 191 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Pih1d3Q3KNI6 218 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Ccdc34Q3UI66 367 aa29.58■■■□□ 2.33
Ctdnep1-201ENSMUST00000108593 Zfp868Q3UTQ6 422 aa29.58■■■□□ 2.33
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms