RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Sema3gQ4LFA9 780 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 AA792892Q8C6S1 278 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zswim3Q8CFL8 695 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Swsap1Q8VCI7 278 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Olfr690Q8VH18 315 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sertad3Q9ERC3 197 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mgl2A9XX86 381 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Dnajb5O89114 348 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 TtlP38585 377 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Foxo6Q70KY4 559 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Clip3B9EHT4 547 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Phb2O35129 299 aaKnown RBP16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Bmp4P21275 408 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Msx2Q03358 267 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc38a4Q8R1S9 547 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tcam1Q99NB3 548 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tmem39aQ9CYC3 486 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp738B8JJX8 793 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 AboP38649 332 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 S100a1P56565 94 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Grb7Q03160 535 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 4930502E18RikQ14BQ3 236 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cxcr1Q810W6 351 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fam161aQ8QZV6 448 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Rcbtb2Q99LJ7 551 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp84Q9D654 559 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Phf11bB4XVQ1 276 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 GiprQ0P543 460 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Wdr59Q8C0M0 992 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 MtapQ9CQ65 283 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Praf2Q9JIG8 178 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm7233E9PZI8 198 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm9732F6QVC4 198 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8104K7N744 198 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Meaf6Q2VPQ9 191 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp791Q497V9 528 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Brsk1Q5RJI5 778 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc39a10Q6P5F6 833 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cyp20a1Q8BKE6 462 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nae1Q8VBW6 534 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm16286Q9CQX6 220 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 ItpaQ9D892 198 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ift43Q9DA69 206 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mfsd2aQ9DA75 534 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pcdhgb8A0A140LI48 931 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm9493F6SVV1 192 aaKnown RBP16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nsmce4aG3XA30 381 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 NapsaO09043 419 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gabrr2P56476 465 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pld5Q3UNN8 536 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 BB287469Q3UT53 144 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 BpiQ67E05 483 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tmem214Q8BM55 687 aaKnown RBP16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cyp3a41aQ9JMA7 504 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Vmn1r238E9Q373 306 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tas2r7P59530 312 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8332Q3UTA4 144 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Laptm5Q61168 261 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nr2e1Q64104 385 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Smad3Q8BUN5 425 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Colec10Q8CF98 277 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mtfr1lQ9CWE0 289 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ifnar2O35664 513 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 MedagQ14BA6 303 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Srebf2Q3U1N2 1130 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cnpy1Q4VAB4 94 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Naaladl1Q7M758 745 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Stx16Q8BVI5 326 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 E330021D16RikQ8BW45 371 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp617Q91WM0 559 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cers2Q924Z4 380 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fzd1O70421 642 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 TktP40142 623 aaKnown RBP16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sh2d1b2Q45HK4 132 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cdh12Q5RJH3 794 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Grik1Q60934 836 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fndc3bQ6NWW9 1207 aaKnown RBP16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Smco3Q8BQM7 225 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pxdc1Q8JZU6 231 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nkiras2Q9CR56 191 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Olfr1508Q9R0K4 310 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Vamp2P63044 116 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fstl1Q62356 306 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tmem151bQ68FE7 561 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Aoc1Q8JZQ5 751 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 FgbQ8K0E8 481 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gspt1Q8R050 636 aaKnown RBP16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Capn8Q91VA3 703 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fam118aQ91YN1 357 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Arpc2Q9CVB6 300 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zdhhc21Q9D270 265 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Dusp26Q9D700 211 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp946F6VWU8 523 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Lix1Q6P566 282 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cdh7Q8BM92 785 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 MastlQ8C0P0 865 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Hdac7Q8C2B3 938 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 ItpkaQ8R071 459 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc25a19Q9DAM5 318 aa16.31■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pik3c2bE9QAN8 1632 aa16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 83.4 ms