RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Pcdha8Q91Y12 946 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Asb6Q91ZU1 418 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gpn3Q9D3W4 284 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 SqorQ9R112 450 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ccdc163A2AGD7 326 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 1700001O22RikA2APZ1 375 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zmynd12A2BGJ5 363 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r125D3Z3M1 369 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Kbtbd6E9PYD7 486 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Kbtbd7G5E8C2 690 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hcn1O88704 910 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Svs4P18419 113 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Csf3rP40223 837 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trappc9Q3U0M1 1148 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hist2h2acQ64523 129 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hist2h2aa1Q6GSS7 130 aaKnown RBP10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trappc6aQ78XR0 159 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Amigo1Q80ZD8 492 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 MmaaQ8C7H1 415 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Rcor1Q8CFE3 480 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Defb36Q8K3U4 67 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 McmbpQ8R3C0 642 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pcdhga6Q91XY2 932 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Diras1Q91Z61 198 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Rnf111Q99ML9 989 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Atp13a2Q9CTG6 1169 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Wdr54Q9R0D8 334 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zfhx2Q2MHN3 2562 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zbtb10E9Q8X5 861 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cyp2j8G3UZ38 503 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm4847G3X946 537 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tpst2O88856 376 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 AprtP08030 180 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Surf2P09926 257 aaKnown RBP10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sbk3P0C5K0 361 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Myf6P15375 242 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ctps2P70303 586 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Npy2rP97295 381 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Scn1bP97952 218 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 PepdQ11136 493 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tmem173Q3TBT3 378 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mapkapk3Q3UMW7 384 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ube2r2Q6ZWZ2 238 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tigd3Q7TM95 470 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mterf2Q8BKY8 385 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sh3glb2Q8R3V5 400 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fam32aQ9CR80 112 aaKnown RBP10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 4933425L06RikQ9D3Z8 585 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ribc2Q9D4Q1 309 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Smurf2A2A5Z6 748 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc43a3A2AVZ9 502 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm11239E9Q5Z9 360 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm11237F2Z3W5 360 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm11238F2Z478 360 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 H2-AaP01910 256 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gp6P0C191 313 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ifrd1P19182 449 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 ThrbP37242 461 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Alox5P48999 674 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nat3P50296 290 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ap2m1P84091 435 aaKnown RBP10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm428Q3UTE2 360 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm11487Q5RIS0 354 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Foxj1Q61660 421 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Egfl8Q6GUQ1 293 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc16a9Q7TM99 508 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr1418Q7TQS3 318 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tusc3Q8BTV1 347 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nckap1lQ8K1X4 1134 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fuca1Q99LJ1 452 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Asf1aQ9CQE6 204 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sec13Q9D1M0 322 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 PacrglQ9D3X5 248 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nacc2Q9DCM7 586 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trip4Q9QXN3 581 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dyrk1bQ9Z188 629 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Htatip2Q9Z2G9 242 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Keap1Q9Z2X8 624 aaKnown RBP10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Lamb1P02469 1786 aa10.67□□□□□ -0.7
Msh3-201ENSMUST00000022220 Phf11cB4XVP9 339 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Daw1D3Z7A5 415 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r88L7N1W8 857 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ikzf3O08900 507 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ncam2O35136 837 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fzd1O70421 642 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Kcnk4O88454 398 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hoxc11P31313 304 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Stat5aP42230 793 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pip5k1bP70181 539 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 PamP97467 979 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Serpina3mQ03734 418 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pag1Q3U1F9 429 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Snx21Q3UR97 363 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Enpp3Q6DYE8 874 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Eme1Q8BJW7 570 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Arhgap22Q8BL80 702 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Asb14Q8C6Y6 587 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cstf2tQ8C7E9 632 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 B3gnt7Q8K0J2 397 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 D8Ertd738eQ8R1F0 94 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms