RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 RNF187Q5TA31 235 aaPredicted RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 TTC23LQ6PF05 361 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 SPESP1Q6UW49 350 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 CES3Q6UWW8 571 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 UNC5AQ6ZN44 842 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 CT55Q8WUE5 264 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 SKA2Q8WVK7 121 aaPredicted RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 CPT1BQ92523 772 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 CLIP3Q96DZ5 547 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 OSBPL9Q96SU4 736 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 NRTNQ99748 197 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 KIFC1Q9BW19 673 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 PITPNM3Q9BZ71 974 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 KLHL25Q9H0H3 589 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 XAB2Q9HCS7 855 aaKnown RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 LATS2Q9NRM7 1088 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 OR6C2Q9NZP2 312 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 SERTAD3Q9UJW9 196 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 PLAGL1Q9UM63 463 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 CCDC88CQ9P219 2028 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 HELZ2Q9BYK8 2649 aaKnown RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 TLN1Q9Y490 2541 aaKnown RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 IQCF5A8MTL0 148 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 ISM1B1AKI9 464 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 C21orf140B9A014 251 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 PHF2O75151 1096 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 KLK3P07288 261 aaPredicted RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 CHRM5P08912 532 aaPredicted RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 PVRP15151 417 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 UGT2B7P16662 529 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 AOAHP28039 575 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 OAS2P29728 719 aaKnown RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 RPS15P62841 145 aaKnown RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 ABRQ12979 859 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 KCNAB2Q13303 367 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 ERV3-1Q14264 604 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 CRTC2Q53ET0 693 aaPredicted RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 ARMC3Q5W041 872 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 UNC5DQ6UXZ4 953 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 GPR135Q8IZ08 494 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 LKAAEAR1Q8TD35 194 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 APOBEC4Q8WW27 367 aaKnown RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 MR1Q95460 341 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 MFSD3Q96ES6 412 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 TRAPPC9Q96Q05 1148 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 TWSG1Q9GZX9 223 aa13.87□□□□□ -0.19
IRF3-224ENST00000599680 GEMIN8Q9NWZ8 242 aaKnown RBP13.87□□□□□ -0.19
IRF3-224ENST00000599680 A0A0J9YY10 115 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 MAGEB16A2A368 324 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 CDC14CA4D256 554 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 GOLGA8KD6RF30 607 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 GOLGA8TH3BQL2 631 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 GOLGA8MH3BSY2 632 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 AVILO75366 819 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 GPC4O75487 556 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 CREG1O75629 220 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 PLA2G2AP14555 144 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 RPS3P23396 243 aaKnown RBP eCLIP13.86□□□□□ -0.197e-7■■■■□ 25.3
IRF3-224ENST00000599680 F8A1P23610 371 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 MAGEA6P43360 314 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 ITGA1P56199 1179 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 THOC5Q13769 683 aaKnown RBP13.86□□□□□ -0.19
IRF3-224ENST00000599680 PPP1R7Q15435 360 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 CYP1B1Q16678 543 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 ATP1A1-AS1Q5TC04 95 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 ANKRD22Q5VYY1 191 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 KIAA0930Q6ICG6 404 aaPredicted RBP13.86□□□□□ -0.19
IRF3-224ENST00000599680 FAM199XQ6PEV8 388 aaPredicted RBP13.86□□□□□ -0.19
IRF3-224ENST00000599680 TRIM73Q86UV7 250 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 VRK3Q8IV63 474 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 DCUN1D3Q8IWE4 304 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 RAB42Q8N4Z0 105 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 C19orf47Q8N9M1 422 aaKnown RBP13.86□□□□□ -0.19
IRF3-224ENST00000599680 OR1L3Q8NH93 324 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 ACTRT1Q8TDG2 376 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 COG1Q8WTW3 980 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 SEC14L1Q92503 715 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 TCTN2Q96GX1 697 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 FOPNLQ96NB1 174 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 TCF12Q99081 682 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 P2RY12Q9H244 342 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 ACTL8Q9H568 366 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 ACTR5Q9H9F9 607 aaPredicted RBP13.86□□□□□ -0.19
IRF3-224ENST00000599680 IRAK4Q9NWZ3 460 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 SLC39A10Q9ULF5 831 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 POLHQ9Y253 713 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 VPS9D1Q9Y2B5 631 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 PCDHGA6Q9Y5G7 932 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 MRFAP1Q9Y605 127 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 BOD1L1Q8NFC6 3051 aa13.86□□□□□ -0.19
IRF3-224ENST00000599680 SDR42E2A6NKP2 422 aa13.85□□□□□ -0.19
IRF3-224ENST00000599680 E5RI56 91 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms