RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CELF2O95319 508 aaKnown RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 RETP07949 1114 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 GNPDA1P46926 289 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ARF5P84085 180 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 VAC14Q08AM6 782 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 RAPSNQ13702 412 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 TRIM71Q2Q1W2 868 aaKnown RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 RNF168Q8IYW5 571 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 RGL4Q8IZJ4 473 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ARL10Q8N8L6 244 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 GLB1L3Q8NCI6 653 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SOCS4Q8WXH5 440 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 FAM193BQ96PV7 902 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 EGFL8Q99944 293 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SH3GL1Q99961 368 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 AASSQ9UDR5 926 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 DNMT3LQ9UJW3 386 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ANGPTL3Q9Y5C1 460 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CPQQ9Y646 472 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SLC16A6O15403 523 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 EOMESO95936 686 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 KLKB1P03952 638 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 CTPS1P17812 591 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 SLC11A2P49281 568 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 GZMMP51124 257 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 TWF1Q12792 350 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF846Q147U1 533 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 KCNA10Q16322 511 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 TRIM16LQ309B1 348 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 CACHD1Q5VU97 1274 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 RNF219Q5W0B1 726 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 PLPP6Q8IY26 295 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 CLDN19Q8N6F1 224 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 ALPK1Q96QP1 1244 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 LRTM1Q9HBL6 345 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 PKP3Q9Y446 797 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 PCDHB9Q9Y5E1 797 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 PRSS21Q9Y6M0 314 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 OR6C75A6NL08 312 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 SLC28A1O00337 649 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 BCKDKO14874 412 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 ULK1O75385 1050 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 UGT2B4P06133 528 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 RYKP34925 604 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 ATP5C1P36542 298 aaKnown RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 MAD2L1Q13257 205 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF177Q13360 481 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 NCEH1Q6PIU2 408 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 SLC24A5Q71RS6 500 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 GALNT5Q7Z7M9 940 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 CALHM3Q86XJ0 350 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 FBLIM1Q8WUP2 373 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 MTFMTQ96DP5 389 aaKnown RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 BARD1Q99728 777 aaKnown RBP18.66■□□□□ 0.58
SCARF1-206ENST00000573852 CD244Q9BZW8 370 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 MAGEE1Q9HCI5 957 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 AKIP1Q9NQ31 210 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 OARD1Q9Y530 152 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 PCDHB1Q9Y5F3 818 aa18.66■□□□□ 0.58
SCARF1-206ENST00000573852 FRMPD3Q5JV73 1810 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 LOC730098B7Z3J9 87 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 FTH1P02794 183 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 GSNP06396 782 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 ALPIP09923 528 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 RXRGP48443 463 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 IL5RAQ01344 420 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 OCA2Q04671 838 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 CD300CQ08708 224 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 FAM151BQ6UXP7 276 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 TRIM46Q7Z4K8 759 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 SERPINA9Q86WD7 417 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 CARNMT1Q8N4J0 409 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 FAM126AQ9BYI3 521 aaPredicted RBP18.65■□□□□ 0.58
SCARF1-206ENST00000573852 GPR63Q9BZJ6 419 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 CLPBQ9H078 707 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 TRIT1Q9H3H1 467 aaKnown RBP18.65■□□□□ 0.58
SCARF1-206ENST00000573852 MAGIXQ9H6Y5 334 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 ERVK-18Q9QC07 812 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 MTRRQ9UBK8 725 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 OPTCQ9UBM4 332 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 DAPK2Q9UIK4 370 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 PCDHGA4Q9Y5G9 962 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 SLC38A8A6NNN8 435 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 DNAJB5O75953 348 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 B3GALT4O96024 378 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 CCDC159P0C7I6 412 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 ATF6P18850 670 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 GPR17Q13304 367 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 MTA1Q13330 715 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 LAPTM4AQ15012 233 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 OXA1LQ15070 435 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 FAM26DQ5JW98 314 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 ATG9BQ674R7 924 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 CES5AQ6NT32 575 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 SLCO6A1Q86UG4 719 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 SNX29P2Q8IUI4 249 aa18.65■□□□□ 0.58
SCARF1-206ENST00000573852 MCOLN3Q8TDD5 553 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms