RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 VCLP18206 1134 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 RPS3P23396 243 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNF8-211ENST00000512243 RXRGP48443 463 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 CD151P48509 253 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 PRLHRP49683 370 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 CTSCP53634 463 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 EFTUD2Q15029 972 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■□□□□ 10.6
SNF8-211ENST00000512243 SF3A2Q15428 464 aaKnown RBP9.25□□□□□ -0.93
SNF8-211ENST00000512243 CSRP2Q16527 193 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 INSCQ1MX18 579 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 KLHL38Q2WGJ6 581 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 HLA-BQ31612 363 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 KBTBD12Q3ZCT8 623 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 PYCR3Q53H96 274 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 PTRHD1Q6GMV3 140 aaKnown RBP9.25□□□□□ -0.93
SNF8-211ENST00000512243 CYS1Q717R9 158 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 FSTL5Q8N475 847 aaPredicted RBP9.25□□□□□ -0.93
SNF8-211ENST00000512243 MINDY1Q8N5J2 469 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 PPM1NQ8N819 430 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 PNPLA1Q8N8W4 532 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 RASGEF1AQ8N9B8 481 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 AENQ8WTP8 325 aaKnown RBP9.25□□□□□ -0.93
SNF8-211ENST00000512243 LPGAT1Q92604 370 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 CAVIN3Q969G5 261 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 SGF29Q96ES7 293 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 CYTH2Q99418 400 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 CPNE1Q99829 537 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 TIMM29Q9BSF4 260 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 EDEM2Q9BV94 578 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 LRRC61Q9BV99 259 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 TCEAL2Q9H3H9 227 aaPredicted RBP9.25□□□□□ -0.93
SNF8-211ENST00000512243 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 SPASTQ9UBP0 616 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 REV1Q9UBZ9 1251 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 CORO1CQ9ULV4 474 aaPredicted RBP9.25□□□□□ -0.93
SNF8-211ENST00000512243 GPR34Q9UPC5 381 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 PRKAB1Q9Y478 270 aa9.25□□□□□ -0.93
SNF8-211ENST00000512243 A0A1B0GTQ1 180 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 KLHL33A6NCF5 533 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 CXorf49A8MYA2 514 aaPredicted RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 E5RI56 91 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 CTIFO43310 598 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 AQP9O43315 295 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 PIAS2O75928 621 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 ESR1P03372 595 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 F7P08709 466 aaPredicted RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 GSTM1P09488 218 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 ACP5P13686 325 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 EPHA8P29322 1005 aaPredicted RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 FMO4P31512 558 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 GP5P40197 560 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 LEPRP48357 1165 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 CSE1LP55060 971 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 ADARP55265 1226 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 IL9RQ01113 521 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 ILF2Q12905 390 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 ILF3Q12906 894 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNF8-211ENST00000512243 PWP1Q13610 501 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 BRD3Q15059 726 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 ELOCQ15369 112 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 TCEA2Q15560 299 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 TMEM201Q5SNT2 666 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 UBAP2Q5T6F2 1119 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 KCTD16Q68DU8 428 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 CNSTQ6PJW8 725 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 CHST15Q7LFX5 561 aaPredicted RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 ASCL5Q7RTU5 278 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 STRA8Q7Z7C7 330 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 GKN2Q86XP6 184 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 ZNF548Q8NEK5 533 aaPredicted RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 UHMK1Q8TAS1 419 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 HM13Q8TCT9 377 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 LMX1AQ8TE12 382 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 NAT14Q8WUY8 206 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 PANX3Q96QZ0 392 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 FUT8Q9BYC5 575 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 GSDMCQ9BYG8 508 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 KRTAP9-9Q9BYP9 154 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 KRTAP9-4Q9BYQ2 154 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 TMEM168Q9H0V1 697 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 OSGEPL1Q9H4B0 414 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 PARD6AQ9NPB6 346 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 TMEM9BQ9NQ34 198 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 SMYD2Q9NRG4 433 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 TRNAU1APQ9NX07 287 aaKnown RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 SLAMF8Q9P0V8 285 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 PNMA8BQ9ULN7 279 aaPredicted RBP9.24□□□□□ -0.93
SNF8-211ENST00000512243 CRYL1Q9Y2S2 319 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 COMMD10Q9Y6G5 202 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 PRSS21Q9Y6M0 314 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 DNAH14Q0VDD8 3507 aa9.24□□□□□ -0.93
SNF8-211ENST00000512243 EXOC1LA0A1B0GW35 172 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 CCDC151A5D8V7 595 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 SGTAO43765 313 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 KCNJ13O60928 360 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 SDC3O75056 442 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 POP7O75817 140 aaKnown RBP9.23□□□□□ -0.93
SNF8-211ENST00000512243 PIAS1O75925 651 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 HAUS5O94927 633 aa9.23□□□□□ -0.93
SNF8-211ENST00000512243 HTR3BO95264 441 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms