RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CCDC138Q96M89 665 aa11.68□□□□□ -0.54
PKP4-213ENST00000486254 CDK15Q96Q40 435 aa11.68□□□□□ -0.54
PKP4-213ENST00000486254 TRIM15Q9C019 465 aa11.68□□□□□ -0.54
PKP4-213ENST00000486254 MTG2Q9H4K7 406 aa11.68□□□□□ -0.54
PKP4-213ENST00000486254 MBD1Q9UIS9 605 aaPredicted RBP11.68□□□□□ -0.54
PKP4-213ENST00000486254 CNOT6Q9ULM6 557 aaKnown RBP11.68□□□□□ -0.54
PKP4-213ENST00000486254 EIF3LQ9Y262 564 aaKnown RBP11.68□□□□□ -0.54
PKP4-213ENST00000486254 TCRBV3S1A0A5B6 114 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CCDC154A6NI56 674 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 AQP12BA6NM10 295 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 GPR89AB7ZAQ6 455 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 TSPAN6O43657 245 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 LILRB5O75023 590 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 RECQL5O94762 991 aaPredicted RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 GPR89BP0CG08 455 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 C6P13671 934 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 HSD3B1P14060 373 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 SLC6A2P23975 617 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 HSD3B2P26439 372 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 PBX2P40425 430 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 SLC7A2P52569 658 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 PNLIPRP1P54315 467 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 EEFSECP57772 596 aaKnown RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 MS4A2Q01362 244 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 MESP2Q0VG99 397 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 TLR1Q15399 786 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 MAP7D1Q3KQU3 841 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 SYTL3Q4VX76 610 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 C6orf10Q5SRN2 563 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 OGFRL1Q5TC84 451 aaPredicted RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 LIPJQ5W064 366 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CYP20A1Q6UW02 462 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ADAMTSL4Q6UY14 1074 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 RNF111Q6ZNA4 994 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 PTRH1Q86Y79 214 aaKnown RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 VRK3Q8IV63 474 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 AQP12AQ8IXF9 295 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 YAF2Q8IY57 180 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 BHLHE22Q8NFJ8 381 aaPredicted RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 ZFYVE19Q96K21 471 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 FOPNLQ96NB1 174 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 BTBD9Q96Q07 612 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 UHRF1Q96T88 793 aaPredicted RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 DPEP2Q9H4A9 486 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ACTL8Q9H568 366 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ACTR8Q9H981 624 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 FBRSQ9HAH7 460 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 GPRC5BQ9NZH0 403 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 GIMAP2Q9UG22 337 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 AP3M1Q9Y2T2 418 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 TRANK1O15050 2925 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 TBC1D3BA6NDS4 549 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 LOC730098B7Z3J9 87 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 KAT7O95251 611 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 C7P10643 843 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 PRPS2P11908 318 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 VARSP26640 1264 aaKnown RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 MAP4P27816 1152 aaKnown RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 MAPK1P28482 360 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ARL1P40616 181 aaPredicted RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 CASP2P42575 452 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 GDF5P43026 501 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CTSCP53634 463 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CSTF3Q12996 717 aaKnown RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 RPA4Q13156 261 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CAMK2GQ13555 558 aaPredicted RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 PTCHD3Q3KNS1 767 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ATAT1Q5SQI0 421 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CACHD1Q5VU97 1274 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 LCN8Q6JVE9 175 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 IRGCQ6NXR0 463 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 MSANTD1Q6ZTZ1 278 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 DET1Q7L5Y6 550 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 SLC15A3Q8IY34 581 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ZNF366Q8N895 744 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 FCRL1Q96LA6 429 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 P2RY13Q9BPV8 354 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 SLC28A3Q9HAS3 691 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 LRTM1Q9HBL6 345 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 TRIM39Q9HCM9 518 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 PRSS16Q9NQE7 514 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 C1orf109Q9NX04 203 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 KLQ9UEF7 1012 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 RIMS3Q9UJD0 308 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 CNOT11Q9UKZ1 510 aaKnown RBP11.67□□□□□ -0.54
PKP4-213ENST00000486254 RNF11Q9Y3C5 154 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 PCDHA9Q9Y5H5 950 aa11.67□□□□□ -0.54
PKP4-213ENST00000486254 ASPDHA6ND91 283 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 ARHGEF33A8MVX0 844 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 H0YJX3 145 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 NME4O00746 187 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 PRMT3O60678 531 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 BAG2O95816 211 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 ADH1BP00325 375 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 APODP05090 189 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 G6PDP11413 515 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 JUPP14923 745 aa11.66□□□□□ -0.54
PKP4-213ENST00000486254 SLC7A1P30825 629 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms