RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NPWQ8N729 165 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 ZNF557Q8N988 423 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 LHFPL5Q8TAF8 219 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 BARD1Q99728 777 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 MRPL45Q9BRJ2 306 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 BRINP2Q9C0B6 783 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 KCNN2Q9H2S1 579 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 AS3MTQ9HBK9 375 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 AP3M1Q9Y2T2 418 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 PCDHB5Q9Y5E4 795 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 MICAL3Q7RTP6 2002 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 EFCAB10A6NFE3 127 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 ASB14A6NK59 587 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 DFNA5O60443 496 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 TNFRSF21O75509 655 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 DAPP51397 102 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 ERVK-8P63133 956 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 RBP5P82980 135 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 TNK1Q13470 666 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 PWP1Q13610 501 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 PON2Q15165 354 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 KIAA0930Q6ICG6 404 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 PIM3Q86V86 326 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 VWA5B2Q8N398 1253 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 ZNF675Q8TD23 568 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 SLC2A14Q8TDB8 520 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 MSANTD3Q96H12 275 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 CCDC115Q96NT0 180 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 MYOCQ99972 504 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 RNF146Q9NTX7 359 aa9.24□□□□□ -0.93
SYNPO2-204ENST00000448416 COL1A2P08123 1366 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 EPHA2P29317 976 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 LCP2Q13094 533 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SEMA3BQ13214 749 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 IER5Q5VY09 327 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SHQ1Q6PI26 577 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 TMPRSS11AQ6ZMR5 421 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 LDB1Q86U70 411 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 LIX1LQ8IVB5 337 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 UBE2J2Q8N2K1 259 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 GALNT11Q8NCW6 608 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 ZNF548Q8NEK5 533 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 ASB15Q8WXK1 588 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 DNASE1L2Q92874 299 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 TTLL2Q9BWV7 592 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 NIPAL2Q9H841 368 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 HOXC10Q9NYD6 342 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SLC9A3R1O14745 358 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 PMPCBO75439 489 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 MAFO75444 373 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 WDR47O94967 919 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SCELO95171 688 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 C1QBP02746 253 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 ICAM2P13598 275 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 WEE1P30291 646 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CDKN2DP55273 166 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CYP4F2P78329 520 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SP2Q02086 613 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CREMQ03060 361 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CYP4F3Q08477 520 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 TP53BP2Q13625 1128 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 TBCEQ15813 527 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CPZQ66K79 652 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 FAM171BQ6P995 826 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 OR6B3Q8NGW1 331 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 NUDT8Q8WV74 236 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 DACT3Q96B18 629 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SIGLEC11Q96RL6 698 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 RNF121Q9H920 327 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 VNN3Q9NY84 501 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 VAPAQ9P0L0 249 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 KIF17Q9P2E2 1029 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 NDRG4Q9ULP0 352 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 B4DXG7 233 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SEC22BO75396 215 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 WBP4O75554 376 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 PRR35P0CG20 571 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 ANK1P16157 1881 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CD72P21854 359 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 DSC3Q14574 896 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 TMEM132DQ14C87 1099 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CELF3Q5SZQ8 465 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 STRIP1Q5VSL9 837 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 OR8J3Q8NGG0 315 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 MYDGFQ969H8 173 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 C18orf25Q96B23 403 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 CELF6Q96J87 481 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 C8orf37Q96NL8 207 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SMURF1Q9HCE7 757 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 SLC23A1Q9UHI7 598 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 KLHL21Q9UJP4 597 aa9.23□□□□□ -0.93
SYNPO2-204ENST00000448416 PCDHGA12O60330 932 aa9.22□□□□□ -0.93
SYNPO2-204ENST00000448416 SERPINA1P01009 418 aa9.22□□□□□ -0.93
SYNPO2-204ENST00000448416 ZNF250P15622 560 aa9.22□□□□□ -0.93
SYNPO2-204ENST00000448416 CFL1P23528 166 aaKnown RBP9.22□□□□□ -0.93
SYNPO2-204ENST00000448416 CSTF2P33240 577 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYNPO2-204ENST00000448416 RGS6P49758 472 aa9.22□□□□□ -0.93
SYNPO2-204ENST00000448416 ATN1P54259 1190 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms