RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CCR7P32248 378 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 EIF3BP55884 814 aaKnown RBP13.6□□□□□ -0.23
TREX1-202ENST00000444177 PRKG2Q13237 762 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 PTK6Q13882 451 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 KCNAB1Q14722 419 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 TMED2Q15363 201 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 ATP1A1-AS1Q5TC04 95 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 ZNF572Q7Z3I7 529 aaPredicted RBP13.6□□□□□ -0.23
TREX1-202ENST00000444177 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
TREX1-202ENST00000444177 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
TREX1-202ENST00000444177 OR4E2Q8NGC2 313 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 OR5AR1Q8NGP9 310 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 APOBEC4Q8WW27 367 aaKnown RBP13.6□□□□□ -0.23
TREX1-202ENST00000444177 LCN9Q8WX39 176 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 STAMBPL1Q96FJ0 436 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 CD180Q99467 661 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 TRIM4Q9C037 500 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 CLMPQ9H6B4 373 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 IL1RAPL1Q9NZN1 696 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 LNPEPQ9UIQ6 1025 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 CROTQ9UKG9 612 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 PADI1Q9ULC6 663 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 MAD1L1Q9Y6D9 718 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 RP1L1Q8IWN7 2480 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 BSNQ9UPA5 3926 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 PIKFYVEQ9Y2I7 2098 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 SDR42E2A6NKP2 422 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 PFDN6O15212 129 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 TIAF1O95411 115 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 APOA4P06727 396 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 SPTBP11277 2137 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 ARL4DP49703 201 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 CSRP3P50461 194 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 KPNA2P52292 529 aaKnown RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 PLOD1Q02809 727 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 ACY1Q03154 408 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 HSPA14Q0VDF9 509 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 TUBB3Q13509 450 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 DHX34Q14147 1143 aaKnown RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 TYSND1Q2T9J0 566 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 RNF187Q5TA31 235 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 RNASEH2BQ5TBB1 312 aaKnown RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 IZUMO3Q5VZ72 239 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 PWWP2BQ6NUJ5 590 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 SYDE1Q6ZW31 735 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 BPHLQ86WA6 291 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 LRRC6Q86X45 466 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 PTRH1Q86Y79 214 aaKnown RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 KMT5CQ86Y97 462 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 FCRL4Q96PJ5 515 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 PANX3Q96QZ0 392 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 CARD6Q9BX69 1037 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 P2RY12Q9H244 342 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 XKR8Q9H6D3 395 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 CDC23Q9UJX2 597 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 KCND3Q9UK17 655 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 RARRES3Q9UL19 164 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 TDRKHQ9Y2W6 561 aaKnown RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 PCDHB3Q9Y5E6 796 aa13.59□□□□□ -0.23
TREX1-202ENST00000444177 UBR5O95071 2799 aaPredicted RBP13.59□□□□□ -0.23
TREX1-202ENST00000444177 FAM237BA0A1B0GVD1 139 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
TREX1-202ENST00000444177 MATN2O00339 956 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 BTN3A1O00481 513 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 KATNA1O75449 491 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 MT-ND3P03897 115 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 EBLN1P0CF75 366 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 OGNP20774 298 aaKnown RBP13.58□□□□□ -0.24
TREX1-202ENST00000444177 CDH3P22223 829 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
TREX1-202ENST00000444177 ACADLP28330 430 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 PTGIRP43119 386 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 MAGEA3P43357 314 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 HSD11B2P80365 405 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 DR1Q01658 176 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 CKAP4Q07065 602 aaKnown RBP13.58□□□□□ -0.24
TREX1-202ENST00000444177 THOC5Q13769 683 aaKnown RBP13.58□□□□□ -0.24
TREX1-202ENST00000444177 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 CTSL3PQ5NE16 218 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 FBXO38Q6PIJ6 1188 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 PCGF5Q86SE9 256 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 AMIGO1Q86WK6 493 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 VRK3Q8IV63 474 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 D2HGDHQ8N465 521 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 KIF18AQ8NI77 898 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 ASZ1Q8WWH4 475 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 NRTNQ99748 197 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 TFB2MQ9H5Q4 396 aaKnown RBP13.58□□□□□ -0.24
TREX1-202ENST00000444177 LHX9Q9NQ69 397 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 ZNF71Q9NQZ8 489 aaPredicted RBP13.58□□□□□ -0.24
TREX1-202ENST00000444177 FGF21Q9NSA1 209 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 SOHLH2Q9NX45 425 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 POMT2Q9UKY4 750 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 PLAGL1Q9UM63 463 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 ICKQ9UPZ9 632 aa13.58□□□□□ -0.24
TREX1-202ENST00000444177 MAGEB16A2A368 324 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms