RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 PEPDP12955 493 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TARBP2Q15633 366 aaKnown RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 C1orf189Q5VU69 101 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 QSOX2Q6ZRP7 698 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ERMP1Q7Z2K6 904 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SNX20Q7Z614 316 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 CIR1Q86X95 450 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 MARCH9Q86YJ5 346 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF548Q8NEK5 533 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 AKAP1Q92667 903 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 CTPS2Q9NRF8 586 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 GMIPQ9P107 970 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 DCLK1O15075 740 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 FFAR2O15552 330 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 CLDN11O75508 207 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 RHOQP17081 205 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SLC9A3P48764 834 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 PPP3R1P63098 170 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 RHDQ02161 417 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 DSC3Q14574 896 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 EPGNQ6UW88 154 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SERPINA13PQ6UXR4 307 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TMC8Q8IU68 726 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM192Q8IY95 271 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SLCO2A1Q92959 643 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TRIM43Q96BQ3 446 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 HMCESQ96FZ2 354 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM209Q96SK2 561 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 EVLQ9UI08 416 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SLC27A6Q9Y2P4 619 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ARCN1P48444 511 aaKnown RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ADAM15Q13444 863 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF782Q6ZMW2 699 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 DNAJB8Q8NHS0 232 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 APOBEC3GQ9HC16 384 aaKnown RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF282Q9UDV7 671 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 TLR4O00206 839 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 PER2O15055 1255 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 SERPINA3P01011 423 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 SF1Q15637 639 aaKnown RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 NOMO2Q5JPE7 1267 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 SERPINA9Q86WD7 417 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 C1orf127Q8N9H9 656 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM59LQ9UK28 342 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 KLF11O14901 512 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 BCAS2O75934 225 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 CDRT1O95170 752 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 SCARB2Q14108 478 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 RAB12Q6IQ22 244 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 LGI4Q8N135 537 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 CORO1BQ9BR76 489 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 HMGXB4Q9UGU5 601 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 CLIC3O95833 236 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 GRIA1P42261 906 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 NRLP54845 237 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 GPX6P59796 221 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 RPA4Q13156 261 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 HEPACAMQ14CZ8 416 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM236Q5W0B7 351 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ABHD15Q6UXT9 468 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 RANBP3LQ86VV4 465 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ASB12Q8WXK4 309 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 WACQ9BTA9 647 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 TMED9Q9BVK6 235 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ZBTB26Q9HCK0 441 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 RNF6Q9Y252 685 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 DIP2BQ9P265 1576 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 NT5EP21589 574 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ARF1P84077 181 aaKnown RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ANKDD1AQ495B1 522 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 LINGO4Q6UY18 593 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF641Q96N77 438 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-203ENST00000421085 AIFM2Q9BRQ8 373 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 ZSCAN5AQ9BUG6 496 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 CD84Q9UIB8 345 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 PCDHGC4Q9Y5F7 938 aa12.13□□□□□ -0.47
CLCN4-203ENST00000421085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 KLHL33A6NCF5 533 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 SEPT4O43236 478 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 SLC7A4O43246 635 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TFPIP10646 304 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 GSK3BP49841 420 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF155Q12901 538 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF304Q9HCX3 659 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 BRD7Q9NPI1 651 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ACTR3BQ9P1U1 418 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 HTRA2O43464 458 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms