RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NEK10Q6ZWH5 1172 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 CUZD1Q86UP6 607 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 MAML2Q8IZL2 1156 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 PDPRQ8NCN5 879 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 CADM4Q8NFZ8 388 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TFGQ92734 400 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 PKP4Q99569 1192 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TIMM29Q9BSF4 260 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 ZDHHC5Q9C0B5 715 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 RMI1Q9H9A7 625 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 PRMT8Q9NR22 394 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TBC1D29Q9UFV1 150 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 ZDHHC2Q9UIJ5 367 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 WDR87Q6ZQQ6 2873 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 SPTY2D1-AS1A0A0U1RR47 76 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 C10orf142B7Z368 130 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 GFYI3L273 518 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 WDR47O94967 919 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 C1orf105O95561 183 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SLC16A8O95907 504 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 IDSP22304 550 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PRDX3P30048 256 aaKnown RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 CLCQ05315 142 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 EIF2B5Q13144 721 aaKnown RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 KRT33BQ14525 404 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 CLCA4Q14CN2 919 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SFTPA2Q8IWL1 248 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SNX31Q8N9S9 440 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 OR52B6Q8NGF0 335 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 OR6Y1Q8NGX8 325 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 ATP6V1E2Q96A05 226 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PRR11Q96HE9 360 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 TRIM55Q9BYV6 548 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 DPEP2Q9H4A9 486 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 ZBTB26Q9HCK0 441 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SCHIP1Q9P0W5 487 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 OPTCQ9UBM4 332 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 CCDC189A1A4V9 331 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 E2F3O00716 465 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SNX3O60493 162 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SDC3O75056 442 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 RPS17P08708 135 aaKnown RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 CTSEP14091 401 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 AQP5P55064 265 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PTK2BQ14289 1009 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 LPAL2Q16609 132 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PRRT3Q5FWE3 981 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 FOXR1Q6PIV2 292 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 LPCAT2Q7L5N7 544 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 GOLGA7Q7Z5G4 137 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PARGQ86W56 976 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SYTL1Q8IYJ3 562 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PHACTR4Q8IZ21 702 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 PIWIL2Q8TC59 973 aaKnown RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 SEC16BQ96JE7 1060 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 FERD3LQ96RJ6 166 aa15.25■□□□□ 0.03
SHANK2-204ENST00000409530 INSM2Q96T92 566 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 ILKAPQ9H0C8 392 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 NOL11Q9H8H0 719 aaKnown RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 APOBEC3BQ9UH17 382 aaKnown RBP15.25■□□□□ 0.03
SHANK2-204ENST00000409530 STX16-NPEPL1H3BU86 382 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 STX16O14662 325 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 KLK8O60259 260 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 NPHS1O60500 1241 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 CRCPO75575 148 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 JUNP05412 331 aaKnown RBP15.24■□□□□ 0.03
SHANK2-204ENST00000409530 ENO2P09104 434 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-204ENST00000409530 ACADLP28330 430 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 SERPINB3P29508 390 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 GTF2H2Q13888 395 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 ZXDCQ2QGD7 858 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-204ENST00000409530 PTCHD3Q3KNS1 767 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 SULT1C3Q6IMI6 304 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 GTF2H2CQ6P1K8 395 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 SUSD1Q6UWL2 747 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 DTWD2Q8NBA8 298 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 PATE1Q8WXA2 126 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 CNDP1Q96KN2 507 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 TMEM120AQ9BXJ8 343 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 PRM3Q9NNZ6 103 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 PTBP2Q9UKA9 531 aaKnown RBP15.24■□□□□ 0.03
SHANK2-204ENST00000409530 SPEGQ15772 3267 aa15.24■□□□□ 0.03
SHANK2-204ENST00000409530 GPR37L1O60883 481 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 TNFP01375 233 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 HOXC4P09017 264 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-204ENST00000409530 JUNDP17535 347 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 FOXA1P55317 472 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 RACK1P63244 317 aaKnown RBP15.23■□□□□ 0.03
SHANK2-204ENST00000409530 SH3BP2P78314 561 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 ILF3Q12906 894 aaKnown RBP eCLIP15.23■□□□□ 0.035e-8■■■■□ 23.8
SHANK2-204ENST00000409530 NAE1Q13564 534 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 CACNA2D3Q8IZS8 1091 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 EBF4Q9BQW3 602 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 NUF2Q9BZD4 464 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 CD244Q9BZW8 370 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 RDH14Q9HBH5 336 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 FSCN3Q9NQT6 498 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 STOX2Q9P2F5 926 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-204ENST00000409530 SLC22A14Q9Y267 594 aa15.23■□□□□ 0.03
SHANK2-204ENST00000409530 RAP2CQ9Y3L5 183 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms