RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PIGZQ86VD9 579 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CBWD2Q8IUF1 395 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CHPFQ8IZ52 775 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 C2orf69Q8N8R5 385 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 UXS1Q8NBZ7 420 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 OR9I1Q8NGQ6 314 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SLC35B2Q8TB61 432 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 RDH11Q8TC12 318 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 DYNC2LI1Q8TCX1 351 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 C10orf90Q96M02 699 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 KREMEN1Q96MU8 473 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SPATA33Q96N06 139 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 OPALINQ96PE5 141 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 GSX2Q9BZM3 304 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PIGUQ9H490 435 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ACTR8Q9H981 624 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 DNAJB9Q9UBS3 223 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TRPS1Q9UHF7 1281 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SLC23A1Q9UHI7 598 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ADAM28Q9UKQ2 775 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 FARP1Q9Y4F1 1045 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 MN1Q10571 1320 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ROBO3Q96MS0 1386 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MYH9P35579 1960 aaKnown RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 RHPN2P1A8MT19 583 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TO15178 435 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 PTP4A3O75365 173 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 UGT2B17O75795 530 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CNTN5O94779 1100 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 KLHL18O94889 574 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 LYPLA2O95372 231 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SLC2A3P11169 496 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 GSK3BP49841 420 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 BAMBIQ13145 260 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 HSF5Q4G112 596 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 UNC5DQ6UXZ4 953 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 DEF8Q6ZN54 512 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 NIPA1Q7RTP0 329 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 FAM126BQ8IXS8 530 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF614Q8N883 585 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CHDHQ8NE62 594 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TRPV1Q8NER1 839 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TOE1Q96GM8 510 aaKnown RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MYRFLQ96LU7 910 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 PDCD2LQ9BRP1 358 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF436Q9C0F3 470 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 BRD9Q9H8M2 597 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ANKRA2Q9H9E1 313 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SMURF1Q9HCE7 757 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 XPR1Q9UBH6 696 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ZDHHC2Q9UIJ5 367 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 LEF1Q9UJU2 399 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 NENFQ9UMX5 172 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 A0A1B0GVM2 712 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TP73O15350 636 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 KHDRBS3O75525 346 aaKnown RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ITGB1P05556 798 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SNHG28P0DPA3 235 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TXNP10599 105 aaKnown RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 G0S2P27469 103 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 GRIA1P42261 906 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 RAB2AP61019 212 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CHAF1BQ13112 559 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CSHL1Q14406 222 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 UGT8Q16880 541 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 PGBD3Q8N328 593 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ATPAF2Q8N5M1 289 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 KDM1BQ8NB78 822 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 HEXDCQ8WVB3 486 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 RNFT2Q96EX2 444 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CERS2Q96G23 380 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 DPYSL5Q9BPU6 564 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CHIAQ9BZP6 476 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 NKIRAS2Q9NYR9 191 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 DTLQ9NZJ0 730 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MAP10Q9P2G4 905 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MORF4L1Q9UBU8 362 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ANKRD6Q9Y2G4 727 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 DERAQ9Y315 318 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 METTL15A6NJ78 407 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 WASHC1A8K0Z3 465 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MAFO75444 373 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 PPM1BO75688 479 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CD63P08962 238 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 RD3LP0DJH9 198 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 LBPP18428 481 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 PRKCHP24723 683 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 AXLP30530 894 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 LCN1P31025 176 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SDC2P34741 201 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 NRLP54845 237 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SOX10P56693 466 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TSPAN5P62079 268 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 LRRC74AQ0VAA2 488 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 TUBB3Q13509 450 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 PSMD5Q16401 504 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 CTF1Q16619 201 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 LEXMQ3ZCV2 418 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms