RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CDC14AQ9UNH5 594 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 GLYATL1P3A0A0U1RQE8 302 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 TLR4O00206 839 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 URODP06132 367 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 PTGER3P43115 390 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 DSC3Q14574 896 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 ZNF267Q14586 743 aaPredicted RBP17.75■□□□□ 0.43
SMC4-201ENST00000344722 PIGGQ5H8A4 983 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 TOMM5Q8N4H5 51 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 SPPL2BQ8TCT7 592 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 ZFP3Q96NJ6 502 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 SMURF2Q9HAU4 748 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 ZFYVE1Q9HBF4 777 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 MAB21L2Q9Y586 359 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 CREG1O75629 220 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 UFM1P61960 85 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 CCBE1Q6UXH8 406 aaPredicted RBP17.75■□□□□ 0.43
SMC4-201ENST00000344722 SYVN1Q86TM6 617 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 DENND1CQ8IV53 801 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 COL26A1Q96A83 441 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 TMEM74Q96NL1 305 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 SEC14L4Q9UDX3 406 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 C3P01024 1663 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ZSCAN5BA6NJL1 495 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 A8MV72 311 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 MSI1O43347 362 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 DPEP1P16444 411 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 RPS3P23396 243 aaKnown RBP eCLIP17.74■□□□□ 0.437e-64■■■■■ 337.8
SMC4-201ENST00000344722 IVDP26440 423 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 PPP5CP53041 499 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ATXN1P54253 815 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 ZBTB6Q15916 424 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ASB18Q6ZVZ8 466 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 RNF180Q86T96 592 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CAND1Q86VP6 1230 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 CPNE9Q8IYJ1 553 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 GPR88Q9GZN0 384 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 PDZD7Q9H5P4 517 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 PAQR5Q9NXK6 330 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 WRAP73Q9P2S5 460 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 RUVBL1Q9Y265 456 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 SOCS2O14508 198 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 PTTG1O95997 202 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CLCN4P51793 760 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ARFIP1P53367 373 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CGB2Q6NT52 195 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ZNF557Q8N988 423 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 NTAN1Q96AB6 310 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 IL1RAPQ9NPH3 570 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 TAS2R9Q9NYW1 312 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 RAI2Q9Y5P3 530 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 DUOX1Q9NRD9 1551 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ERAL1O75616 437 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 SIX3O95343 332 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 PIGRP01833 764 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CHRM5P08912 532 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 ADCYAP1R1P41586 468 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 PLD1Q13393 1074 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 SHISA4Q96DD7 197 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 POLR2J3Q9H1A7 115 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 C12orf71A8MTZ7 269 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 BHMG1C9JSJ3 638 aaPredicted RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 PLD2O14939 933 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 CDRT1O95170 752 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CRYBG2Q8N1P7 616 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 KLHL36Q8N4N3 616 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 BPIFB1Q8TDL5 484 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CREB3L1Q96BA8 519 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 ZC3H10Q96K80 434 aaKnown RBP17.74■□□□□ 0.43
SMC4-201ENST00000344722 NR2E3Q9Y5X4 410 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 COL1A2P08123 1366 aa17.74■□□□□ 0.43
SMC4-201ENST00000344722 CXCL11O14625 94 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 RAB2AP61019 212 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 CXCL9Q07325 125 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 RPTNQ6XPR3 784 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 LSM14AQ8ND56 463 aaKnown RBP17.73■□□□□ 0.43
SMC4-201ENST00000344722 MGME1Q9BQP7 344 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 FUNDC2Q9BWH2 189 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 CEPT1Q9Y6K0 416 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 H3BMQ9 156 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 SERPINA3P01011 423 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 PNLIPRP1P54315 467 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 HEPACAMQ14CZ8 416 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 LINGO2Q7L985 606 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 COG8Q96MW5 612 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 DUSP26Q9BV47 211 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 EBPLQ9BY08 206 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 SLC6A15Q9H2J7 730 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 METTL21EPA6NDL7 271 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 IFNA6P05013 189 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 KCNAB2Q13303 367 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 DCDC5Q6ZRR9 648 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 ESAMQ96AP7 390 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 LGALS12Q96DT0 336 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 MAT2BQ9NZL9 334 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 RIIAD1A6NNX1 92 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms