RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GTF2H4Q92759 462 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SAV1Q9H4B6 383 aaPredicted RBP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SLA2Q9H6Q3 261 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 KPNA5O15131 536 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 PTTG1O95997 202 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 RPS3P23396 243 aaKnown RBP eCLIP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 LCP2Q13094 533 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 NHSL2Q5HYW2 709 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 TAPT1Q6NXT6 567 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 PROSER1Q86XN7 944 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 OR7D4Q8NG98 312 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 COL26A1Q96A83 441 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 ITCHQ96J02 903 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SIGLEC10Q96LC7 697 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 PCDHGA8Q9Y5G5 932 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SLC25A14O95258 325 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 RPN2P04844 631 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 GSK3BP49841 420 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ACAP2Q15057 778 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 USP41Q3LFD5 358 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 PARP15Q460N3 678 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 FNDC3BQ53EP0 1204 aaKnown RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 SPATA19Q7Z5L4 167 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 SPARTQ8N0X7 666 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 CNIH3Q8TBE1 160 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 STYXQ8WUJ0 223 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 NELL1Q92832 810 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 SLC45A3Q96JT2 553 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ZNF778Q96MU6 729 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ZNF558Q96NG5 402 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 CACNG4Q9UBN1 327 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 FBXW11Q9UKB1 542 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 RAI2Q9Y5P3 530 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 GON4LQ3T8J9 2241 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 A0A1B0GW55 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4L2P0CJ85 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4L3P0CJ86 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4L4P0CJ87 422 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4L5P0CJ88 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4L6P0CJ89 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4L7P0CJ90 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 P2RX3P56373 397 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 EIF2B5Q13144 721 aaKnown RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 RFTN1Q14699 578 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 FAM110CQ1W6H9 321 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 FAM122CQ6P4D5 195 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 MYDGFQ969H8 173 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ZFYVE1Q9HBF4 777 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 DUX4Q9UBX2 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ENTPD4Q9Y227 616 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 UBXN8O00124 270 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 HAT1O14929 419 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ALDH3A2P51648 485 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 CYP4F8P98187 520 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 SCRN3Q0VDG4 424 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 KCNAB2Q13303 367 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 LINGO4Q6UY18 593 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 CELF2-AS1Q8N7Q2 184 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 OR13F1Q8NGS4 319 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 SLC47A1Q96FL8 570 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 FEM1CQ96JP0 617 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 QRFPRQ96P65 431 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 HOXD1Q9GZZ0 328 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 RNF208Q9H0X6 261 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 IPPKQ9H8X2 491 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 GPN2Q9H9Y4 310 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 EIF2B3Q9NR50 452 aaKnown RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 RAD18Q9NS91 495 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ERVK-18Q9QC07 812 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 KCNN3Q9UGI6 736 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 MKLN1Q9UL63 735 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 LYVE1Q9Y5Y7 322 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 PRKCAP17252 672 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 ITGA1P56199 1179 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 POU6F2P78424 691 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-201ENST00000337331 LRIT3Q3SXY7 679 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 NOXA1Q86UR1 476 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 MZB1Q8WU39 189 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 SUSD6Q92537 303 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 PSMG2Q969U7 264 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 C8orf48Q96LL4 319 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 TMEM74Q96NL1 305 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 FTHL17Q9BXU8 183 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 MAPRE3Q9UPY8 281 aa15.78■□□□□ 0.12
NPHP3-201ENST00000337331 TBC1D3BA6NDS4 549 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 RPLP0P05388 317 aaKnown RBP15.77■□□□□ 0.12
NPHP3-201ENST00000337331 BCL2A1Q16548 175 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 SLC36A3Q495N2 470 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 TIFABQ6ZNK6 161 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 SLC38A6Q8IZM9 456 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 ACBD6Q9BR61 282 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.12
NPHP3-201ENST00000337331 ZNF624Q9P2J8 865 aaPredicted RBP15.77■□□□□ 0.12
NPHP3-201ENST00000337331 ZNF490Q9ULM2 529 aaPredicted RBP15.77■□□□□ 0.12
NPHP3-201ENST00000337331 LOC100130705A0A1B0GUX0 176 aa15.77■□□□□ 0.11
NPHP3-201ENST00000337331 H3BUI4 141 aa15.77■□□□□ 0.11
NPHP3-201ENST00000337331 ITPKAP23677 461 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms