RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 PPARGP37231 505 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TUBB4BP68371 445 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 PLOD1Q02809 727 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TUBB2AQ13885 445 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TYSND1Q2T9J0 566 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 KIAA0930Q6ICG6 404 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-201ENST00000275036 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 FAM199XQ6PEV8 388 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TRIM73Q86UV7 250 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 SLC38A9Q8NBW4 561 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 MCUQ8NE86 351 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 FLVCR1-AS1Q8TAF5 88 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 LPGAT1Q92604 370 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 STAMBPL1Q96FJ0 436 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 BIRC8Q96P09 236 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TRAPPC9Q96Q05 1148 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TUBB2BQ9BVA1 445 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 KLHL25Q9H0H3 589 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 SPHK1Q9NYA1 384 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 ACTR10Q9NZ32 417 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 TDRKHQ9Y2W6 561 aaKnown RBP13.97□□□□□ -0.17
HMGN3-201ENST00000275036 HEATR5BQ9P2D3 2071 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 C2orf74A8MZ97 194 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 CES2O00748 559 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 ABCB7O75027 752 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 NDUFS3O75489 264 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 SLCO2B1O94956 709 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 F7P08709 466 aaPredicted RBP13.96□□□□□ -0.17
HMGN3-201ENST00000275036 PEBP1P30086 187 aaKnown RBP13.96□□□□□ -0.17
HMGN3-201ENST00000275036 MAGEA3P43357 314 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 FNTAP49354 379 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 EIF3BP55884 814 aaKnown RBP13.96□□□□□ -0.17
HMGN3-201ENST00000275036 SARNPP82979 210 aaKnown RBP13.96□□□□□ -0.17
HMGN3-201ENST00000275036 ABRQ12979 859 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 KCNAB2Q13303 367 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 GRB7Q14451 532 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 DEFB109BQ30KR1 87 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 ZNF789Q5FWF6 425 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 PTRHD1Q6GMV3 140 aaKnown RBP13.96□□□□□ -0.17
HMGN3-201ENST00000275036 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 SPESP1Q6UW49 350 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 PRICKLE2Q7Z3G6 844 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 OTUD6BQ8N6M0 293 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 LMNTD1Q8N9Z9 388 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 FCRL4Q96PJ5 515 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 OR2A14Q96R47 310 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 MENTQ9BUN1 341 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 EFHD1Q9BUP0 239 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 TRIM4Q9C037 500 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 SLC25A18Q9H1K4 315 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 LHX9Q9NQ69 397 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 CIDEBQ9UHD4 219 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 POLG2Q9UHN1 485 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 GNPTGQ9UJJ9 305 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 PYCARDQ9ULZ3 195 aa13.96□□□□□ -0.17
HMGN3-201ENST00000275036 ZCWPW2A0A1B0GU75 182 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 PIPSLA2A3N6 862 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 F8W8V4 182 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 SUV39H1O43463 412 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 APOA4P06727 396 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CHRM5P08912 532 aaPredicted RBP13.95□□□□□ -0.18
HMGN3-201ENST00000275036 MLNP12872 115 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 UGT2B7P16662 529 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 TCN2P20062 427 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 FMO4P31512 558 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 SHMT2P34897 504 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CCR10P46092 362 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 DNASE1L3Q13609 305 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 ERV3-1Q14264 604 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 ZIC1Q15915 447 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 ANKRD20A4Q4UJ75 823 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CRTC2Q53ET0 693 aaPredicted RBP13.95□□□□□ -0.18
HMGN3-201ENST00000275036 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
HMGN3-201ENST00000275036 TMTC4Q5T4D3 741 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 LCN10Q6JVE6 187 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CASC4Q6P4E1 433 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CENPUQ71F23 418 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 BPHLQ86WA6 291 aaPredicted RBP13.95□□□□□ -0.18
HMGN3-201ENST00000275036 LINC01555Q8NAE3 123 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 OR1L3Q8NH93 324 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CFAP61Q8NHU2 1237 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 SIGLEC10Q96LC7 697 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 CATSPER2Q96P56 530 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 TSSK1BQ9BXA7 367 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 DDX47Q9H0S4 455 aaKnown RBP13.95□□□□□ -0.18
HMGN3-201ENST00000275036 ADNPQ9H2P0 1102 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 XAB2Q9HCS7 855 aaKnown RBP13.95□□□□□ -0.18
HMGN3-201ENST00000275036 FAM60AQ9NP50 221 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 KCND1Q9NSA2 647 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 GALPQ9UBC7 116 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 PADI1Q9ULC6 663 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 PCDHGA6Q9Y5G7 932 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 NFS1Q9Y697 457 aa13.95□□□□□ -0.18
HMGN3-201ENST00000275036 MYO18BQ8IUG5 2567 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms