RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 FAM72AQ5TYM5 149 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 FAM72DQ6L9T8 149 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 SMARCD3Q6STE5 483 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 FAM72BQ86X60 149 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 CHPFQ8IZ52 775 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 FIBCD1Q8N539 461 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 MEIOBQ8N635 442 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 ARMC5Q96C12 935 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 MUS81Q96NY9 551 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 IGFLR1Q9H665 355 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 TUBA8Q9NY65 449 aaPredicted RBP13.32□□□□□ -0.28
TCF3-201ENST00000262965 RBPJLQ9UBG7 517 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 PTGDR2Q9Y5Y4 395 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 ARHGEF33A8MVX0 844 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 NFKBIEO00221 500 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 CLIC1O00299 241 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 ASGR1P07306 291 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 WASP42768 502 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 ZNF280AP59817 542 aaPredicted RBP13.32□□□□□ -0.28
TCF3-201ENST00000262965 SLC10A2Q12908 348 aaPredicted RBP13.32□□□□□ -0.28
TCF3-201ENST00000262965 MYLK3Q32MK0 819 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
TCF3-201ENST00000262965 TIFABQ6ZNK6 161 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 CYP2U1Q7Z449 544 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 GHDCQ8N2G8 530 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 CXorf40BQ96DE9 158 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 AURKBQ96GD4 344 aaPredicted RBP13.32□□□□□ -0.28
TCF3-201ENST00000262965 ZFP3Q96NJ6 502 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 MIR1-1HGQ9H1L0 117 aa13.32□□□□□ -0.28
TCF3-201ENST00000262965 XPNPEP2O43895 674 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 XYLBO75191 536 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 CYP11A1P05108 521 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 T-ENOLP0DO92 83 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 MAPK12P53778 367 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 PLA2G16P53816 162 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 IFI44LQ53G44 452 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 OR5AK3PQ8NH89 298 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 TRNT1Q96Q11 434 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 GAL3ST1Q99999 423 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 DUSP26Q9BV47 211 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 A0A1W2PP18 115 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 GSAPA4D1B5 854 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 FABP12A6NFH5 140 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 IFI30P13284 250 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 ELK4P28324 431 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 SF1Q15637 639 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 GLB1L3Q8NCI6 653 aaPredicted RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 ZFAND2BQ8WV99 257 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 POP5Q969H6 163 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 E7ESA3 106 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 BOLA2-SMG1P6H3BVE0 249 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 ARVCFO00192 962 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 CCNB2O95067 398 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 CYP3A5P20815 502 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 ZNF10P21506 573 aaPredicted RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 RPS3AP61247 264 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 NFKB2Q00653 900 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■■■□□ 16.5
TCF3-201ENST00000262965 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 PPP1R16AQ96I34 528 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 NSUN5Q96P11 429 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 TXLNGYQ9BZA5 131 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 COMMD9Q9P000 198 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 SDHDO14521 159 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 LIN54Q6MZP7 749 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 POMZP3Q6PJE2 187 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 FAM98AQ8NCA5 519 aaKnown RBP13.31□□□□□ -0.28
TCF3-201ENST00000262965 HAPLN3Q96S86 360 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 NPY6RQ99463 290 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 CPQQ9Y646 472 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
TCF3-201ENST00000262965 C5P01031 1676 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 LRRC14BA6NHZ5 514 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 FAM25EA8MYX2 175 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 ATG13O75143 517 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 AGTR2P50052 363 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 KCNQ1P51787 676 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 CDH4P55283 916 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 ARF5P84085 180 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 PPP2R2BQ00005 443 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 FUT10Q6P4F1 479 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 OR4F6Q8NGB9 312 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 OR10G2Q8NGC3 310 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 FAXDC2Q96IV6 333 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 MFSD1Q9H3U5 465 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 KERAO60938 352 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 SCN2BO60939 215 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 CNTN5O94779 1100 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 CDH5P33151 784 aaPredicted RBP13.3□□□□□ -0.28
TCF3-201ENST00000262965 OMPP47874 163 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 VBP1P61758 197 aa13.3□□□□□ -0.28
TCF3-201ENST00000262965 ZNHIT3Q15649 155 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms