RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Rps27lQ6ZWY3 84 aaKnown RBP13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Sept11Q8C1B7 431 aaKnown RBP13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Castor2Q8CAB8 329 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Sik2Q8CFH6 931 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Angptl7Q8R1Q3 337 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 NlnQ91YP2 704 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Mta3Q924K8 591 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Slc13a2Q9ES88 586 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Arhgap36B1AUC7 590 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Scml2B1AVB3 969 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 S100zB9EJL3 99 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Itga10E9Q6R1 1167 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Ces2hF6Z9B9 558 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Nkx1-1G3UXB3 402 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Gm16427J3QN52 483 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Sdc4O35988 198 aaKnown RBP13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Tsta3P23591 321 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Gabarapl2P60521 117 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Col19a1Q0VF58 1136 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Slc27a5Q4LDG0 689 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Eps15l1Q60902 907 aaKnown RBP13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Bhlhb9Q6PB60 539 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 4930503B20RikQ80ZP0 234 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 C1rbQ8CFG9 706 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Tbc1d14Q8CGA2 694 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Lrrc66Q8K0B3 872 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 CenpiQ8K1K4 746 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Appl1Q8K3H0 707 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Olfr371Q8VGB8 312 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Retreg3Q9CQV4 466 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Cep97Q9CZ62 856 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Slco2a1Q9EPT5 643 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Trhr2Q9ERT2 382 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Med20Q9R0X0 212 aa13.09□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Nup205A0A0J9YUD5 2061 aaKnown RBP13.08□□□□□ -0.31
Prpf38b-201ENSMUST00000029480 Olfr675A0A1B0GSE1 317 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm10406A6NAS4 205 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm3373A6NAS7 205 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Apol11bE9PUZ0 337 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm3298E9PW80 205 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm2237E9Q501 211 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Tsc22d2E9Q7M2 769 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm10338K7N692 204 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm3591K7N6X2 186 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm3667K7N757 205 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 OmdO35103 423 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Socs5O54928 536 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gpr25P0C5I1 358 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Nfkb1P25799 971 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Bmpr1aP36895 532 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Smpdl3aP70158 445 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Cry1P97784 606 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Emx2Q04744 253 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Treml2Q2LA85 329 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 CenplQ3U3S3 329 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm3558Q5FWC9 205 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gabra5Q8BHJ7 463 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Spata2lQ8BNN1 426 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Teddm1bQ8CC62 306 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 TwnkQ8CIW5 685 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Ccdc59Q8R2N0 240 aaKnown RBP13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Tma16Q9CR02 221 aaKnown RBP13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Art4Q9CRA0 300 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Ppil1Q9D0W5 166 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Q9DAD0 168 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 TesclQ9DAJ7 231 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Chrnb2Q9ERK7 501 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Fbxo17Q9QZM8 286 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Rps6ka2Q9WUT3 733 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Bscl2Q9Z2E9 383 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Nup210Q9QY81 1886 aaKnown RBP13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Ssxb8B1AY40 170 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Tp63O88898 680 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gna12P27600 379 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Hnf1bP27889 558 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Neurog1P70660 244 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Fpr-rs6Q3SXG2 339 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Cyb5r4Q3TDX8 528 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Slc30a10Q3UVU3 470 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Zbtb2Q3V3W4 514 aaKnown RBP13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Tex24Q5DP50 351 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Gm11992Q5SS90 291 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Mtrf1lQ8BJU9 373 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Zdhhc12Q8VC90 267 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Pla2g15Q8VEB4 412 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Aim2Q91VJ1 354 aaKnown RBP13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Plpp3Q99JY8 312 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Fam227aQ9D3V8 625 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Rcan2Q9JHG2 197 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Scube2Q9JJS0 997 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Mapk9Q9WTU6 423 aa13.08□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Vmn2r-ps130A0A140T8U3 855 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Znf683I7HJS4 458 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 MaptP10637 733 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Tfap2cQ61312 449 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Jak2Q62120 1129 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Znf280cQ6P3Y5 742 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Rxfp4Q7TQP4 414 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 PdprQ7TSQ8 878 aa13.07□□□□□ -0.32
Prpf38b-201ENSMUST00000029480 Slc2a12Q8BFW9 622 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms