RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 LNPEPQ9UIQ6 1025 aa13.4□□□□□ -0.26
IRF3-225ENST00000600022 KCTD3Q9Y597 815 aa13.4□□□□□ -0.26
IRF3-225ENST00000600022 CENPEQ02224 2701 aa13.4□□□□□ -0.27
IRF3-225ENST00000600022 UNC79Q9P2D8 2635 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 IGHV5-51A0A0C4DH38 117 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 GPR39O43194 453 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 MT-CYBP00156 380 aaPredicted RBP13.39□□□□□ -0.27
IRF3-225ENST00000600022 NTRK1P04629 796 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 RNF224P0DH78 156 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 FOLR1P15328 257 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 ATP5DP30049 168 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 GEMP55040 296 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 MC1RQ01726 317 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 CHAF1BQ13112 559 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 KYNUQ16719 465 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 PWWP2BQ6NUJ5 590 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 ABRAXAS1Q6UWZ7 409 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 FAM26EQ8N5C1 309 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 TEX19Q8NA77 164 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 NAT14Q8WUY8 206 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 KLHL6Q8WZ60 621 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 TWSG1Q9GZX9 223 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 EPB41L1Q9H4G0 881 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 LRRC40Q9H9A6 602 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 UCK1Q9HA47 277 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 UBP1Q9NZI7 540 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 ZNF711Q9Y462 761 aa13.39□□□□□ -0.27
IRF3-225ENST00000600022 TNRC6AQ8NDV7 1962 aaKnown RBP13.39□□□□□ -0.27
IRF3-225ENST00000600022 ICE1Q9Y2F5 2266 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
IRF3-225ENST00000600022 F5H423 210 aaPredicted RBP13.38□□□□□ -0.27
IRF3-225ENST00000600022 KMOO15229 486 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A9O60656 530 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 CREG1O75629 220 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 CDK14O94921 469 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 GSTA2P09210 222 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 FGF5P12034 268 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 SLC2A4P14672 509 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A6P19224 532 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A1P22309 533 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A4P22310 534 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 GNLYP22749 145 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 CD97P48960 835 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 MPP3Q13368 585 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 SEPT6Q14141 434 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 IL11RAQ14626 422 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 ATP13A5Q4VNC0 1218 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 FAM69BQ5VUD6 431 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 CPZQ66K79 652 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 KDELC1Q6UW63 502 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 FAM83HQ6ZRV2 1179 aaPredicted RBP13.38□□□□□ -0.27
IRF3-225ENST00000600022 LRRTM4Q86VH4 590 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 CAND1Q86VP6 1230 aaKnown RBP13.38□□□□□ -0.27
IRF3-225ENST00000600022 TRIM48Q8IWZ4 208 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 TRAM1L1Q8N609 369 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 FBXO36Q8NEA4 188 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 GPR150Q8NGU9 434 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 STAMBPL1Q96FJ0 436 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 SH3GL2Q99962 352 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 NAT9Q9BTE0 207 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 TMEM109Q9BVC6 243 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 ADGRE3Q9BY15 652 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 GPR63Q9BZJ6 419 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A7Q9HAW7 530 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A10Q9HAW8 530 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 UGT1A8Q9HAW9 530 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 MAGEE1Q9HCI5 957 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 SAMD15Q9P1V8 674 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 PSMD13Q9UNM6 376 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
IRF3-225ENST00000600022 RP1L1Q8IWN7 2480 aaPredicted RBP13.38□□□□□ -0.27
IRF3-225ENST00000600022 SPTBN1Q01082 2364 aaKnown RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 MKRN2OSH3BPM6 223 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 RASGRF2O14827 1237 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 RGS16O15492 202 aaPredicted RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 RRP9O43818 475 aaKnown RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 EBLN1P0CF75 366 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 NELFEP18615 380 aaKnown RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 CA4P22748 312 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 ADRA1AP35348 466 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 CAPZBP47756 277 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 CDK18Q07002 472 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 TMEM115Q12893 351 aaPredicted RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 DNASE1L3Q13609 305 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 KLHL38Q2WGJ6 581 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 NADK2Q4G0N4 442 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 C4orf17Q53FE4 359 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 FNBP1LQ5T0N5 605 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 PRAMEF17Q5VTA0 474 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 LCN10Q6JVE6 187 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 CASC4Q6P4E1 433 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 PRSS42Q7Z5A4 293 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 ANKMY2Q8IV38 441 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms