RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ATP1A1-AS1Q5TC04 95 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 FAM199XQ6PEV8 388 aaPredicted RBP14.62□□□□□ -0.07
LIG1-215ENST00000597901 UNC5AQ6ZN44 842 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 LDB1Q86U70 411 aaPredicted RBP14.62□□□□□ -0.07
LIG1-215ENST00000597901 TBC1D21Q8IYX1 336 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 OR5AR1Q8NGP9 310 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 OR8K5Q8NH50 307 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 HGH1Q9BTY7 390 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 CARD6Q9BX69 1037 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 SLC25A18Q9H1K4 315 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 ADNPQ9H2P0 1102 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 TREX1Q9NSU2 369 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 SOHLH2Q9NX45 425 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 POLG2Q9UHN1 485 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 C2orf74A8MZ97 194 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 SCRG1O75711 98 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 RECKO95980 971 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 ST6GAL1P15907 406 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 NMBRP28336 390 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 CCR7P32248 378 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 CSE1LP55060 971 aaKnown RBP14.61□□□□□ -0.07
LIG1-215ENST00000597901 POLE2P56282 527 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 DNASE1L3Q13609 305 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 ERV3-1Q14264 604 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 TRIP13Q15645 432 aaPredicted RBP14.61□□□□□ -0.07
LIG1-215ENST00000597901 SLC38A9Q8NBW4 561 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 CT55Q8WUE5 264 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 TRAPPC9Q96Q05 1148 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 AP1M1Q9BXS5 423 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 PITPNM3Q9BZ71 974 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 IL22Q9GZX6 179 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 SYTL2Q9HCH5 934 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 CATSPERZQ9NTU4 200 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 ACTR10Q9NZ32 417 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 MARCH4Q9P2E8 410 aaPredicted RBP14.61□□□□□ -0.07
LIG1-215ENST00000597901 ICKQ9UPZ9 632 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 TDRKHQ9Y2W6 561 aaKnown RBP14.61□□□□□ -0.07
LIG1-215ENST00000597901 PCDHGA6Q9Y5G7 932 aa14.61□□□□□ -0.07
LIG1-215ENST00000597901 ATMQ13315 3056 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 TCRBV7S3A2A0A539 114 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 PIPSLA2A3N6 862 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 IQCF5A8MTL0 148 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 MAP3K7O43318 606 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 GPC4O75487 556 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 CREG1O75629 220 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 PVRP15151 417 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 MGAT1P26572 445 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 SHMT2P34897 504 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 CDK16Q00536 496 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 HSPA14Q0VDF9 509 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 ABRQ12979 859 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 KCNAB2Q13303 367 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 SYTL3Q4VX76 610 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 AARS2Q5JTZ9 985 aaKnown RBP14.6□□□□□ -0.07
LIG1-215ENST00000597901 PRAMEF17Q5VTA0 474 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 LRRC8BQ6P9F7 803 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 TMEM126BQ8IUX1 230 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 OR5K2Q8NHB8 316 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 APOBEC4Q8WW27 367 aaKnown RBP14.6□□□□□ -0.07
LIG1-215ENST00000597901 ASZ1Q8WWH4 475 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 MS4A14Q96JA4 679 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 PBKQ96KB5 322 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 KIFC1Q9BW19 673 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 GPR87Q9BY21 358 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 KLHL25Q9H0H3 589 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 LATS2Q9NRM7 1088 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 TUBD1Q9UJT1 453 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 SERTAD3Q9UJW9 196 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 CDYLQ9Y232 598 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 JRKLQ9Y4A0 524 aa14.6□□□□□ -0.07
LIG1-215ENST00000597901 KALRNO60229 2985 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 ZNF106Q9H2Y7 1883 aaKnown RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 C21orf140B9A014 251 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 PRMT5O14744 637 aaPredicted RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 CPNE3O75131 537 aaKnown RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 KLK3P07288 261 aaPredicted RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 FURINP09958 794 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 MSL3P1P0C860 447 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TPSB2P20231 275 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TTPAP49638 278 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TERF1P54274 439 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 NFKB2Q00653 900 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 KCNC4Q03721 635 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 GPS2Q13227 327 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TPSAB1Q15661 275 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 PLEKHS1Q5SXH7 462 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TTC27Q6P3X3 843 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 CES3Q6UWW8 571 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 VRK3Q8IV63 474 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 SLC22A15Q8IZD6 547 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 KRT222Q8N1A0 295 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 RASGEF1CQ8N431 466 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 OR1L3Q8NH93 324 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 LKAAEAR1Q8TD35 194 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 MR1Q95460 341 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 MAGOHBQ96A72 148 aaKnown RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 OR2A14Q96R47 310 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 RUFY1Q96T51 708 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TSSK1BQ9BXA7 367 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 P2RY12Q9H244 342 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms