RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PADI1Q9ULC6 663 aa14.02□□□□□ -0.16
DDX39A-208ENST00000588692 GCN1Q92616 2671 aaKnown RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 BHMG1C9JSJ3 638 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 CPNE3O75131 537 aaKnown RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 KRT14P02533 472 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 APOA4P06727 396 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 MGAT1P26572 445 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 PRDX3P30048 256 aaKnown RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 CCR7P32248 378 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 DLSTP36957 453 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 CRADDP78560 199 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 CDC20Q12834 499 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 GPS1Q13098 491 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 PRKG2Q13237 762 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 BRD3Q15059 726 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 TMED2Q15363 201 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 CYP1B1Q16678 543 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 DNAJC21Q5F1R6 531 aaKnown RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 REXO1L1PQ8IX06 675 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 SLC22A15Q8IZD6 547 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 ADGRF3Q8IZF5 1079 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 EXD3Q8N9H8 876 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 MAGOHBQ96A72 148 aaKnown RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 ZNF501Q96CX3 271 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 PANX3Q96QZ0 392 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 ADNPQ9H2P0 1102 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 KCND1Q9NSA2 647 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 SYBUQ9NX95 663 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 OR6C2Q9NZP2 312 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 MARCH4Q9P2E8 410 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-208ENST00000588692 IL17BQ9UHF5 180 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 CROTQ9UKG9 612 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 SOX13Q9UN79 622 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 ICKQ9UPZ9 632 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 ZNF462Q96JM2 2506 aa14.01□□□□□ -0.17
DDX39A-208ENST00000588692 SLC9B1P1A6NJY1 282 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 C21orf140B9A014 251 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 TERTO14746 1132 aaKnown RBP14□□□□□ -0.17
DDX39A-208ENST00000588692 PFDN6O15212 129 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 SCRG1O75711 98 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 TIAF1O95411 115 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 RPN2P04844 631 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 TCN2P20062 427 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.17
DDX39A-208ENST00000588692 NMBRP28336 390 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 GPR19Q15760 415 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 RNF187Q5TA31 235 aaPredicted RBP14□□□□□ -0.17
DDX39A-208ENST00000588692 MRNIPQ6NTE8 343 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 TTC27Q6P3X3 843 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
DDX39A-208ENST00000588692 ZNF605Q86T29 641 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 TMEM126BQ8IUX1 230 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 SLC35F6Q8N357 371 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 ACTRT1Q8TDG2 376 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 PPM1MQ96MI6 270 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 AP1M1Q9BXS5 423 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 P2RY12Q9H244 342 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 LHX9Q9NQ69 397 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 ACTR10Q9NZ32 417 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 GNPTGQ9UJJ9 305 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 PCDHB3Q9Y5E6 796 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 PCDHGA6Q9Y5G7 932 aa14□□□□□ -0.17
DDX39A-208ENST00000588692 GOLGA6L10A0A0M3HER8 536 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 TCRBV7S3A2A0A539 114 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 PIPSLA2A3N6 862 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 B8ZZF3 427 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 CES2O00748 559 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 KPNA5O15131 536 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 NKX2-8O15522 239 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 KIF5CO60282 957 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 GPC4O75487 556 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 NDUFS3O75489 264 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 RECKO95980 971 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 FAM87AP0C7U9 286 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 MLNP12872 115 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 PAMP19021 973 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 COILP38432 576 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 CCR10P46092 362 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 VPS41P49754 854 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 HSPA14Q0VDF9 509 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 TRIP13Q15645 432 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 PTRHD1Q6GMV3 140 aaKnown RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 KIAA0930Q6ICG6 404 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 FBXO38Q6PIJ6 1188 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 SPESP1Q6UW49 350 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 UNC5DQ6UXZ4 953 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 NAPRTQ6XQN6 538 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 SDCCAG8Q86SQ7 713 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 LDB1Q86U70 411 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 OTUD6BQ8N6M0 293 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 GRK7Q8WTQ7 553 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 MFSD3Q96ES6 412 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 MS4A14Q96JA4 679 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 LRFN5Q96NI6 719 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 TRAPPC9Q96Q05 1148 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 OSBPL9Q96SU4 736 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 FAM117AQ9C073 453 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 XKR8Q9H6D3 395 aa13.99□□□□□ -0.17
DDX39A-208ENST00000588692 XAB2Q9HCS7 855 aaKnown RBP13.99□□□□□ -0.17
DDX39A-208ENST00000588692 GEMIN8Q9NWZ8 242 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms