RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GLB1P16278 677 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 ITGB6P18564 788 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 PREPP48147 710 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 OR1D5P58170 312 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CCL7P80098 99 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 SARNPP82979 210 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CTBP1Q13363 440 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 GTF2H3Q13889 308 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 TYSND1Q2T9J0 566 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 HES3Q5TGS1 186 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CDCP2Q5VXM1 449 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 NKAIN2Q5VXU1 208 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 METRNLQ641Q3 311 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 PACS1Q6VY07 963 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 UNC5AQ6ZN44 842 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 SPRED1Q7Z699 444 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 B3GNT8Q7Z7M8 397 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CD163Q86VB7 1156 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 AMZ2Q86W34 360 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 VRK3Q8IV63 474 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 KRT222Q8N1A0 295 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 OR2L2Q8NH16 312 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 LPGAT1Q92604 370 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 STAMBPL1Q96FJ0 436 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 LINC00615Q96LM1 132 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 RMDN2Q96LZ7 410 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 TTC25Q96NG3 672 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 BIRC8Q96P09 236 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 EBNA1BP2Q99848 306 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 WWP1Q9H0M0 922 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 TMEM9Q9P0T7 183 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CHMP2BQ9UQN3 213 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CDYLQ9Y232 598 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 APOBEC2Q9Y235 224 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 PCDHB1Q9Y5F3 818 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 PCDHGA1Q9Y5H4 931 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 CFAP20Q9Y6A4 193 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 PTPRBP23467 1997 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 MGAT4DA6NG13 374 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 PDZK1P1A8MUH7 402 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 AP3B1O00203 1094 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 NTN3O00634 580 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 USP1O94782 785 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 TRIM16O95361 564 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 POLBP06746 335 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 GP1BAP07359 652 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ERVK-10P10266 1014 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 PGAM1P18669 254 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 GABRB3P28472 473 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CD1CP29017 333 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 NOS3P29474 1203 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ECHS1P30084 290 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CCR7P32248 378 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CSF2RBP32927 897 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 NSG1P42857 185 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 SLC1A2P43004 574 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ABCG1P45844 678 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 FASLGP48023 281 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 PGGT1BP53609 377 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 MPP1Q00013 466 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CKAP4Q07065 602 aaKnown RBP9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 TARDBPQ13148 414 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■■■■□ 20.6
NPLOC4-219ENST00000576713 LAMB3Q13751 1172 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ITIH4Q14624 930 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 NR1D2Q14995 579 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 BRD3Q15059 726 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 RPE65Q16518 533 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 FASTKD1Q53R41 847 aaKnown RBP9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 HSP90AA5PQ58FG0 334 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ZNF549Q6P9A3 640 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ABRAXAS1Q6UWZ7 409 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ZNF574Q6ZN55 896 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 Q6ZS46 218 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 TMPRSS7Q7RTY8 843 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 PCGF5Q86SE9 256 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CILP2Q8IUL8 1156 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CFAP206Q8IYR0 622 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 MMGT1Q8N4V1 131 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 FBXO25Q8TCJ0 367 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 MAPK15Q8TD08 544 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 SEC14L1Q92503 715 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ART4Q93070 314 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 FAM136AQ96C01 138 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CFAP36Q96G28 342 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 DCUN1D1Q96GG9 259 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CARD6Q9BX69 1037 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 TBC1D10AQ9BXI6 508 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 OR52A5Q9H2C5 316 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 COG4Q9H9E3 785 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 RDH14Q9HBH5 336 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 FBXO6Q9NRD1 293 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ZDHHC18Q9NUE0 388 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 OGFRQ9NZT2 677 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 WHRNQ9P202 907 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 CPNE7Q9UBL6 633 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 MED16Q9Y2X0 877 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 FAM169AQ9Y6X4 670 aa9.25□□□□□ -0.93
NPLOC4-219ENST00000576713 ZFC3H1O60293 1989 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 DSPP15924 2871 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 IGHV1OR21-1A0A087WYE8 117 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms