RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ATG2AQ2TAZ0 1938 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM272A0A1B0GTI8 110 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF233A6NK53 670 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 C2CD4DB7Z1M9 353 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TRAPPC3O43617 180 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 GGPS1O95749 300 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 IL1AP01583 271 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 LGALS2P05162 132 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 UNGP13051 313 aaPredicted RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TNFSF8P32971 234 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 HMGA2P52926 109 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 NAPAP54920 295 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 MRPS6P82932 125 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 RIPK1Q13546 671 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ITIH4Q14624 930 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CALCRLQ16602 461 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CCDC40Q4G0X9 1142 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TDRD12Q587J7 1177 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SPOUT1Q5T280 376 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 METTL7BQ6UX53 244 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TMCO2Q7Z6W1 182 aaPredicted RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SLFN11Q7Z7L1 901 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ADGRD2Q7Z7M1 963 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SLC35F3Q8IY50 421 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF548Q8NEK5 533 aaPredicted RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 OR4N2Q8NGD1 307 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CFAP61Q8NHU2 1237 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CREB3L4Q8TEY5 395 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 NELL1Q92832 810 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SIGLEC11Q96RL6 698 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 C16orf70Q9BSU1 422 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM109Q9BVC6 243 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 NSRP1Q9H0G5 558 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 EPB41L5Q9HCM4 733 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 GRHL1Q9NZI5 618 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 EPS15L1Q9UBC2 864 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TBC1D29Q9UFV1 150 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 BAZ2AQ9UIF9 1905 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 MBLAC1A4D2B0 266 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 CETN3O15182 167 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 BCAT2O15382 392 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 ASAP2O43150 1006 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 CLEC3BP05452 202 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SPARCP09486 303 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 NUDT17P0C025 328 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SNHG28P0DPA3 235 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 EZRP15311 586 aaKnown RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 FMO4P31512 558 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 HSD17B4P51659 736 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 STARD6P59095 220 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 GUCY2DQ02846 1103 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 KLHL30Q0D2K2 578 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 XRCC4Q13426 336 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 RUNX2Q13950 521 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 DHX34Q14147 1143 aaKnown RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 LPIN1Q14693 890 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SNCBQ16143 134 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 GKAP1Q5VSY0 366 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 KIAA1614Q5VZ46 1190 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 GBP7Q8N8V2 638 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 NEXN-AS1Q8NBZ9 246 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 ZG16BQ96DA0 208 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 PGM2Q96G03 612 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 ENTPD7Q9NQZ7 604 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 BATF3Q9NR55 127 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 PXMP2Q9NR77 195 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM161AQ9NX61 479 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 DONSONQ9NYP3 566 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SLC12A6Q9UHW9 1150 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 RASAL2Q9UJF2 1139 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 FANCMQ8IYD8 2048 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 UBE4BO95155 1302 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 TTC3P53804 2025 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 A0A087X0M5 115 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 C17orf113A0A1B0GUU1 675 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 A0A1B0GX30 115 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 FRMD3A2A2Y4 597 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SMCO2A6NFE2 343 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 CCDC169A6NNP5 214 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 NPIPB11E5RHQ5 1161 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 I6L893 689 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 CALUO43852 315 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 ATG13O75143 517 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 PALMO75781 387 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 RETP07949 1114 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 FERP16591 822 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 ITGAXP20702 1163 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 RPS9P46781 194 aaKnown RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SLC26A2P50443 739 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 HADHBP55084 474 aaKnown RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SLC8A3P57103 927 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 FAM57BQ71RH2 274 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 SLC24A5Q71RS6 500 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 APLFQ8IW19 511 aaPredicted RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 LRRC43Q8N309 656 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 MRPL43Q8N983 215 aaKnown RBP4.19□□□□□ -1.74
LINC00561-201ENST00000565815 ERGIC1Q969X5 290 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 MSANTD3Q96H12 275 aa4.19□□□□□ -1.74
LINC00561-201ENST00000565815 MMTAG2Q9BU76 263 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms