RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 UGT2B4P06133 528 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 MYCLP1P12525 358 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 LPOP22079 712 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 SLC6A4P31645 630 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 AKT1P31749 480 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 TTPAP49638 278 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 TRAF3Q13114 568 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 ADHFE1Q8IWW8 467 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 SVOPLQ8N434 492 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 CCDC115Q96NT0 180 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 MYOCQ99972 504 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 MGME1Q9BQP7 344 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 DPY30Q9C005 99 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 USE1Q9NZ43 259 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 RIMKLBQ9ULI2 386 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 PNMA8BQ9ULN7 279 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 PMF1-BGLAPU3KQ54 211 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 STX7O15400 261 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 ZNF623O75123 536 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 SEC22BO75396 215 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 DIRAS1O95057 198 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 PGRP06401 933 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 BMP4P12644 408 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 CD6P30203 668 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 CLCN7P51798 805 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 RPS3AP61247 264 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 NCS1P62166 190 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 RPS24P62847 133 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 ILF2Q12905 390 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 NPTX1Q15818 432 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 INAVAQ3KP66 663 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 MORN1Q5T089 497 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 PRR23BQ6ZRT6 265 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 ANKRD46Q86W74 232 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 AADATQ8N5Z0 425 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 OR5K1Q8NHB7 308 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 RORBQ92753 470 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 ZBTB18Q99592 522 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 APOL5Q9BWW9 433 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 RIBC2Q9H4K1 309 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 DCAF13Q9NV06 445 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 ELOVL2Q9NXB9 296 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 KLQ9UEF7 1012 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 RBMX2Q9Y388 322 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 CCL27Q9Y4X3 112 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 PCDHB14Q9Y5E9 798 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 AREL1O15033 823 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 TAPBPO15533 448 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 FFAR2O15552 330 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 AQP9O43315 295 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 KDM1AO60341 852 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 C1QCP02747 245 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 TYMPP19971 482 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 PSMB9P28065 219 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 HOXD12P35452 270 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 OR1G1P47890 313 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 EPS8Q12929 822 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 TOP3AQ13472 1001 aaPredicted RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 CES5AQ6NT32 575 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 SUSD1Q6UWL2 747 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 SBSNQ6UWP8 590 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 B3GNT8Q7Z7M8 397 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 ADCK1Q86TW2 530 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 CYP4Z1Q86W10 505 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 MICU2Q8IYU8 434 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 RPL3LQ92901 407 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 UBE2FQ969M7 185 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 PRDM8Q9NQV8 689 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 GIN1Q9NXP7 522 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 NUDT4Q9NZJ9 180 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 UBA2Q9UBT2 640 aaPredicted RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 INTS6Q9UL03 887 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 PCDHB8Q9UN66 801 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 EIF3LQ9Y262 564 aaKnown RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 RAI2Q9Y5P3 530 aa11.17□□□□□ -0.62
SRP54-213ENST00000556994 ZFP37Q9Y6Q3 630 aaPredicted RBP11.17□□□□□ -0.62
SRP54-213ENST00000556994 HTR3EA5X5Y0 456 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 ANKRD66B4E2M5 251 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 F5H5T6 163 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 CBX4O00257 560 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 CNOT3O75175 753 aaKnown RBP11.16□□□□□ -0.62
SRP54-213ENST00000556994 GABARAPO95166 117 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 MSH3P20585 1137 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 CA5AP35218 305 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 MAPKAPK2P49137 400 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PHC1P78364 1004 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 MGAT3Q09327 533 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 GTF2H3Q13889 308 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.623e-6■■■■□ 22.2
SRP54-213ENST00000556994 CARTPTQ16568 116 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 RUNDC3AQ59EK9 446 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 CARD16Q5EG05 197 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 LINGO4Q6UY18 593 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms