RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ATG4AQ8WYN0 398 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 CPT1BQ92523 772 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 MIB2Q96AX9 1013 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 XKR8Q9H6D3 395 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PCMTD2Q9NV79 361 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 ICKQ9UPZ9 632 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PLAAQ9Y263 795 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PRSS21Q9Y6M0 314 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 CLEC18AA5D8T8 446 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 OR51F1A6NGY5 319 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 MEN1O00255 615 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 FOXN2P32314 431 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 ITIH4Q14624 930 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 CLEC18BQ6UXF7 455 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 ENDOVQ8N8Q3 282 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 CLEC18CQ8NCF0 446 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 PHC3Q8NDX5 983 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 TFGQ92734 400 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 HES6Q96HZ4 224 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 TRAPPC9Q96Q05 1148 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 SYTL2Q9HCH5 934 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 ACTR10Q9NZ32 417 aa16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 FARSAQ9Y285 508 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-205ENST00000548650 ARGFXA6NJG6 315 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 C2orf74A8MZ97 194 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 LIN7AO14910 233 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 KLK3P07288 261 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 CAPN1P07384 714 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 RAB40ALP0C0E4 278 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 CYP2A7P20853 494 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 NSG1P42857 185 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 PTGIRP43119 386 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 KIF5AQ12840 1032 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 PRKG2Q13237 762 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 CCDC38Q502W7 563 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 FAM69BQ5VUD6 431 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 SPESP1Q6UW49 350 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 CDHR3Q6ZTQ4 885 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 SYTL1Q8IYJ3 562 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 TEX19Q8NA77 164 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 OR52K1Q8NGK4 314 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 OR5AR1Q8NGP9 310 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 OR13J1Q8NGT2 312 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 COL26A1Q96A83 441 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 CLIP3Q96DZ5 547 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 KLHL25Q9H0H3 589 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 ACTR5Q9H9F9 607 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 SNX7Q9UNH6 387 aa16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 SPTAN1Q13813 2472 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-205ENST00000548650 CCDC162PA2VCL2 907 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 QSOX1O00391 747 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 PSMD3O43242 534 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 FTH1P02794 183 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 ACADLP28330 430 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 CD97P48960 835 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 OASLQ15646 514 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 PTCHD3Q3KNS1 767 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 ZNF385CQ66K41 422 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 ZNF449Q6P9G9 518 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 LINC00523Q86TU6 105 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 TRIM73Q86UV7 250 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 C19orf47Q8N9M1 422 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 ELMO1Q92556 727 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 NLNQ9BYT8 704 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 MLXIPLQ9NP71 852 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 TCFL5Q9UL49 500 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 PCDHGA9Q9Y5G4 932 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 USP9YO00507 2555 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 SHANK1Q9Y566 2161 aa16.84■□□□□ 0.29
CHMP1A-205ENST00000548650 SLC5A10A0PJK1 596 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 ERI2A8K979 691 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 TPBGLP0DKB5 382 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 UGT2B7P16662 529 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 SHMT2P34897 504 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 MLLT10P55197 1068 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 ITGA1P56199 1179 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 SRSF1Q07955 248 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 CDH17Q12864 832 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 PCM1Q15154 2024 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 NUP210LQ5VU65 1888 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 FLVCR1-AS1Q8TAF5 88 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 SLC25A23Q9BV35 468 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 ING2Q9H160 280 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 ASF1AQ9Y294 204 aa16.83■□□□□ 0.28
CHMP1A-205ENST00000548650 CCDC88CQ9P219 2028 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 BHMG1C9JSJ3 638 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 H3BMH7 237 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 LIASO43766 372 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 CEACAM4O75871 244 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 SUN1O94901 812 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 GABRA4P48169 554 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 PGDP52209 483 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 ACVR1Q04771 509 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 UBAP2LQ14157 1087 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 BRD3Q15059 726 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms