RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CYS1Q717R9 158 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 OOSP2Q86WS3 158 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 SLITRK4Q8IW52 837 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 CTAGE3PQ8IX95 158 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 OR52E1Q8NGJ3 308 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 OR5K2Q8NHB8 316 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 RSC1A1Q92681 617 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 ZDHHC12Q96GR4 267 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 HRASLS2Q9NWW9 162 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 CORO1CQ9ULV4 474 aaPredicted RBP16.37■□□□□ 0.21
LTBR-215ENST00000546296 NFU1Q9UMS0 254 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 PSAT1Q9Y617 370 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 CCDC187A0A096LP49 1063 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 SAT1P21673 171 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 MCM3P25205 808 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 ATP5DP30049 168 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 PHBP35232 272 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 PRKAA1Q13131 559 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 CAMK2BQ13554 666 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 TRA2AQ13595 282 aaKnown RBP eCLIP16.36■□□□□ 0.21
LTBR-215ENST00000546296 C3orf38Q5JPI3 329 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 RBM20Q5T481 1227 aaKnown RBP16.36■□□□□ 0.21
LTBR-215ENST00000546296 HECTD2Q5U5R9 776 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 RAB11FIP2Q7L804 512 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 AMIGO1Q86WK6 493 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 RCBTB1Q8NDN9 531 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 WDR36Q8NI36 951 aaKnown RBP16.36■□□□□ 0.21
LTBR-215ENST00000546296 FBF1Q8TES7 1133 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 NXPE2Q96DL1 559 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 ELMO2Q96JJ3 720 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 SLC30A3Q99726 388 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 CMKLR1Q99788 373 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 NRSN2Q9GZP1 204 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 TFB2MQ9H5Q4 396 aaKnown RBP16.36■□□□□ 0.21
LTBR-215ENST00000546296 XKR8Q9H6D3 395 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 SMYD2Q9NRG4 433 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 MED16Q9Y2X0 877 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 VWA7Q9Y334 891 aa16.36■□□□□ 0.21
LTBR-215ENST00000546296 OR5K3A6NET4 321 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 FAM159BA6NKW6 160 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 CXorf49A8MYA2 514 aaPredicted RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 RASSF9O75901 435 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 MPOP05164 745 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 THRAP10827 490 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 POLR2CP19387 275 aaPredicted RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 CSTF2P33240 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
LTBR-215ENST00000546296 CDKN2DP55273 166 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 GFERP55789 205 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 GABREP78334 506 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 ILF2Q12905 390 aaKnown RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 PDAP1Q13442 181 aaKnown RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 KLHL38Q2WGJ6 581 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 FAM45BPQ6NSW5 357 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 FAM92BQ6ZTR7 304 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 ZC3HC1Q86WB0 502 aaKnown RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 DCUN1D3Q8IWE4 304 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 CPNE9Q8IYJ1 553 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 FBXO39Q8N4B4 442 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 PPM1NQ8N819 430 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 FAM45AQ8TCE6 357 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 CD200R1Q8TD46 325 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 LIN37Q96GY3 246 aaPredicted RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 POLR1BQ9H9Y6 1135 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 NINJ2Q9NZG7 142 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 PLAGL1Q9UM63 463 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 SATB2Q9UPW6 733 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 RUVBL2Q9Y230 463 aaKnown RBP16.35■□□□□ 0.21
LTBR-215ENST00000546296 LOXL2Q9Y4K0 774 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 NFS1Q9Y697 457 aa16.35■□□□□ 0.21
LTBR-215ENST00000546296 GSAPA4D1B5 854 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 CBSLP0DN79 551 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 ENO3P13929 434 aaPredicted RBP16.34■□□□□ 0.21
LTBR-215ENST00000546296 RBMS1P29558 406 aaKnown RBP16.34■□□□□ 0.21
LTBR-215ENST00000546296 ECHS1P30084 290 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 SHMT2P34897 504 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 CBSP35520 551 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 CCNFP41002 786 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 LSSP48449 732 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 RGS4P49798 205 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 EIF3IQ13347 325 aaKnown RBP16.34■□□□□ 0.21
LTBR-215ENST00000546296 GBX1Q14549 363 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 SLMAPQ14BN4 828 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 KBTBD12Q3ZCT8 623 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 RELL1Q8IUW5 271 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 AGBL5Q8NDL9 886 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 MAGEC3Q8TD91 643 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 CPNE1Q99829 537 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 RAB33BQ9H082 229 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 RHOJQ9H4E5 214 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 PDP2Q9P2J9 529 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 EPHA6Q9UF33 1036 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 CIDEBQ9UHD4 219 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 SLC39A10Q9ULF5 831 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 SPEGQ15772 3267 aa16.34■□□□□ 0.21
LTBR-215ENST00000546296 AKAP13Q12802 2813 aa16.33■□□□□ 0.21
LTBR-215ENST00000546296 PTPRBP23467 1997 aa16.33■□□□□ 0.21
LTBR-215ENST00000546296 PIKFYVEQ9Y2I7 2098 aa16.33■□□□□ 0.21
LTBR-215ENST00000546296 FAM95CA0A1B0GW59 222 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 PLD2O14939 933 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms