RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CHRM2P08172 466 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 KRT3P12035 628 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 PFKFB1P16118 471 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 DRD4P21917 467 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 CCT6AP40227 531 aaKnown RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 PTPN9P43378 593 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 GLRBP48167 497 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 OAZ1P54368 228 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 ATP5IP56385 69 aaPredicted RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 RWDD2BP57060 319 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 ACTR3P61158 418 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 SIRPAP78324 504 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 GPC5P78333 572 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 ADORA2A-AS1P86434 159 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 CAP1Q01518 475 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 LCP2Q13094 533 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 BFSP2Q13515 415 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 HNRNPDQ14103 355 aaKnown RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 GRIK4Q16099 956 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 HIST2H2ACQ16777 129 aaPredicted RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 MCMDC2Q4G0Z9 681 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 TAF1BQ53T94 588 aaPredicted RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 GCNT6Q5T4J0 391 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 TMEM211Q6ICI0 200 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 GRHL2Q6ISB3 625 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 TAPT1Q6NXT6 567 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 CASC4Q6P4E1 433 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 WDR88Q6ZMY6 472 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 BEND4Q6ZU67 534 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 ADAMTSL2Q86TH1 951 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 CLEC10AQ8IUN9 316 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 MAFAQ8NHW3 353 aaPredicted RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 B4GALNT2Q8NHY0 566 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 ERMNQ8TAM6 284 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 NETO1Q8TDF5 533 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 TRPC4APQ8TEL6 797 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 HEXDCQ8WVB3 486 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 DHX58Q96C10 678 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 DCPSQ96C86 337 aaKnown RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 SLC7A6OSQ96CW6 309 aaPredicted RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 RNF31Q96EP0 1072 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 DIRC2Q96SL1 478 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 KATNB1Q9BVA0 655 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 ZNF416Q9BWM5 594 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 EXO5Q9H790 373 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 TDRD3Q9H7E2 651 aaKnown RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 MINDY3Q9H8M7 445 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 FARSBQ9NSD9 589 aaKnown RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 UBQLN2Q9UHD9 624 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 SORCS3Q9UPU3 1222 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 MRPS2Q9Y399 296 aaKnown RBP5.43□□□□□ -1.54
DDB1-219ENST00000541513 SLC4A4Q9Y6R1 1079 aa5.43□□□□□ -1.54
DDB1-219ENST00000541513 CNTNAP1P78357 1384 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 A0A0D9SFI3 127 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 FAM237AA0A1B0GTK4 181 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 DNALI1O14645 258 aaPredicted RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 ATP2A1O14983 1001 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 MAPK13O15264 365 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 CHADO15335 359 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 GPAA1O43292 621 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 MED7O43513 233 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 ATG13O75143 517 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 NME6O75414 186 aaPredicted RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 ECI2O75521 394 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 NKX2-2O95096 273 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 MOCS3O95396 460 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 EFEMP2O95967 443 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 CH25HO95992 272 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 TFP02787 698 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 EBLN1P0CF75 366 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 HSPA8P11142 646 aaKnown RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 SERPINB6P35237 376 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 CAPGP40121 348 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 ETV4P43268 484 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 AP3M2P53677 418 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 CDH13P55290 713 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 EIF3EP60228 445 aaKnown RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 DYNLL1P63167 89 aaKnown RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 ZP2Q05996 745 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 MRPL49Q13405 166 aaKnown RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 PDE7AQ13946 482 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 SMN1Q16637 294 aaKnown RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 LRIT3Q3SXY7 679 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 IQCCQ4KMZ1 466 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 XKR3Q5GH77 459 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 PRAMEF20Q5VT98 475 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 ARHGEF16Q5VV41 709 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 SFRP4Q6FHJ7 346 aaPredicted RBP5.42□□□□□ -1.54
DDB1-219ENST00000541513 TMEM108Q6UXF1 575 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 MACC1Q6ZN28 852 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 LRRC70Q7Z2Q7 622 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 NEK8Q86SG6 692 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 NUDT13Q86X67 352 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 SPPL2CQ8IUH8 684 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 REXO1L1PQ8IX06 675 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 ZNF321PQ8N8H1 164 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 AMER3Q8N944 861 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 LEMD2Q8NC56 503 aa5.42□□□□□ -1.54
DDB1-219ENST00000541513 BHLHE23Q8NDY6 225 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms