RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ASB1Q9Y576 335 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 GIPC1O14908 333 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 BNIP3LO60238 219 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 ECI2O75521 394 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 CLDN7O95471 211 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 MATN1P21941 496 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 TTPAP49638 278 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 TSNQ15631 228 aaKnown RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 SCIMPQ6UWF3 145 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 TRIM74Q86UV6 250 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 TRIM73Q86UV7 250 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 C12orf76Q8N812 135 aaPredicted RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 BIRC7Q96CA5 298 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 SEPHS2Q99611 448 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 BRINP2Q9C0B6 783 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 CERS4Q9HA82 394 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 ZFYVE1Q9HBF4 777 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 TBCCD1Q9NVR7 557 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 C2orf16Q68DN1 1984 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 NUP210Q8TEM1 1887 aaPredicted RBP16.83■□□□□ 0.29
SPIDR-227ENST00000541342 C1orf232A0A0U1RR37 186 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 CXorf51AA0A1B0GTR3 108 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 SOBPA7XYQ1 873 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 A8MX80 341 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 SUPT3HB4E1H0 165 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 SUPT3HO75486 399 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 CPNE6O95741 557 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 TCF3P15923 654 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 OR4D2P58180 307 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 SNRPD1P62314 119 aaKnown RBP16.83■□□□□ 0.29
SPIDR-227ENST00000541342 SEMG2Q02383 582 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 NEDD8Q15843 81 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 TBC1D21Q8IYX1 336 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 NAT16Q8N8M0 369 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 BPIFB1Q8TDL5 484 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 TSPEARQ8WU66 669 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 ACOX2Q99424 681 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 GPR21Q99679 349 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 C1orf50Q9BV19 199 aa16.83■□□□□ 0.29
SPIDR-227ENST00000541342 CDC7O00311 574 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 NIPSNAP2O75323 286 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 ELK4P28324 431 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 GPM6BQ13491 265 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 TIGD2Q4W5G0 525 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 RIMKLAQ8IXN7 391 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 FUBP1Q96AE4 644 aaKnown RBP16.83■□□□□ 0.28
SPIDR-227ENST00000541342 MUC13Q9H3R2 512 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 C8orf4Q9NR00 106 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 TAS2R13Q9NYV9 303 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 IFT80Q9P2H3 777 aaPredicted RBP16.83■□□□□ 0.28
SPIDR-227ENST00000541342 BOLA2-SMG1P6H3BVE0 249 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 SERPINA4P29622 427 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 HLCSP50747 726 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 KCNK10P57789 538 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 BNIP3Q12983 259 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 ANKRD26P1Q6NSI1 321 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 FAM151BQ6UXP7 276 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 TAS2R42Q7RTR8 314 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 TSPAN33Q86UF1 283 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 FBXO39Q8N4B4 442 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 PDPRQ8NCN5 879 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 GIPC3Q8TF64 312 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 NUDT8Q8WV74 236 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 CHID1Q9BWS9 393 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 TBC1D14Q9P2M4 693 aa16.83■□□□□ 0.28
SPIDR-227ENST00000541342 NPIPB15A6NHN6 443 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 NAA20P61599 178 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 DPY19L3Q6ZPD9 716 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 OR13F1Q8NGS4 319 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 MIPOL1Q8TD10 442 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 VPS50Q96JG6 964 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 MUS81Q96NY9 551 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 DERL2Q9GZP9 239 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 CCDC68Q9H2F9 335 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 SLC25A13Q9UJS0 675 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 RNF112Q9ULX5 631 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 MRPS23Q9Y3D9 190 aaKnown RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 NEUROG3Q9Y4Z2 214 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 MAGED1Q9Y5V3 778 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 LDLRP01130 860 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 PKMP14618 531 aaKnown RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 HMOX2P30519 316 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 SHMT2P34897 504 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 CASP2P42575 452 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 CACNG1Q06432 222 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 TMEM214Q6NUQ4 689 aaKnown RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 SPATA19Q7Z5L4 167 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 UNC80Q8N2C7 3258 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 PROKR1Q8TCW9 393 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 SGCDQ92629 289 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 ECHDC3Q96DC8 303 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 RSPRY1Q96DX4 576 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 PAIP1Q9H074 479 aaKnown RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 PCTPQ9UKL6 214 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 YBX2Q9Y2T7 364 aaKnown RBP16.82■□□□□ 0.28
SPIDR-227ENST00000541342 PCDHGA11Q9Y5H2 935 aa16.82■□□□□ 0.28
SPIDR-227ENST00000541342 NCF1BA6NI72 391 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 NCF1CA8MVU1 366 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 VPS4BO75351 444 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms