RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 FAF1Q9UNN5 650 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ZNF711Q9Y462 761 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PIKFYVEQ9Y2I7 2098 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 ZNF840PA6NDX5 716 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 J3QRK9 145 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GREM1O60565 184 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 KATNA1O75449 491 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CLDN11O75508 207 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 IMPDH2P12268 514 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PFKLP17858 780 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 RPS3P23396 243 aaKnown RBP eCLIP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 DCTP40126 519 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PIK3CGP48736 1102 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GABARAPL2P60520 117 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PON2Q15165 354 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 BROXQ5VW32 411 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 CARNMT1Q8N4J0 409 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 OR2T12Q8NG77 320 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 FBXL8Q96CD0 374 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 RNF38Q9H0F5 515 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 GKN1Q9NS71 199 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 DCAF13Q9NV06 445 aaKnown RBP9.35□□□□□ -0.91
CNOT4-212ENST00000541284 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 SLC30A1Q9Y6M5 507 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 LAMA3Q16787 3333 aa9.35□□□□□ -0.91
CNOT4-212ENST00000541284 PAPLNO95428 1278 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ZBTB11O95625 1053 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ALPIP09923 528 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CCNA2P20248 432 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CD97P48960 835 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PSMD7P51665 324 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 KPNA1P52294 538 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 RPL38P63173 70 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 HMGCS1Q01581 520 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CACNG1Q06432 222 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PPP1R8Q12972 351 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 SLC14A1Q13336 389 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 SMU1Q2TAY7 513 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FAM174BQ3ZCQ3 159 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FAM98BQ52LJ0 330 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 LRIF1Q5T3J3 769 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ZNF691Q5VV52 312 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 GPR155Q7Z3F1 870 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PHACTR4Q8IZ21 702 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CHCHD4Q8N4Q1 142 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 BPIFB6Q8NFQ5 453 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FBXO30Q8TB52 745 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 WFDC5Q8TCV5 224 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FRS2Q8WU20 508 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 SARS2Q9NP81 518 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 SAGE1Q9NXZ1 904 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 G3V2T6 193 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CBX4O00257 560 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PRKD3O94806 890 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 KCNH1O95259 989 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 SEMG1P04279 462 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 MSH3P20585 1137 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 IDUAP35475 653 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 HMGCLP35914 325 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 MAGEA2P43356 314 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PHEXP78562 749 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 GPRC6AQ5T6X5 926 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 RNF219Q5W0B1 726 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ADAMTSL2Q86TH1 951 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ABI1Q8IZP0 508 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FIG4Q92562 907 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CEP295NLQ96MC4 621 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 STOML2Q9UJZ1 356 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PSME2Q9UL46 239 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ERVK-11Q9UQG0 969 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 KCNE1BA0A087WTH5 132 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PRMT5O14744 637 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 STX7O15400 261 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 OTCP00480 354 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 RHOCP08134 193 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 IL1RNP18510 177 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 CORO1AP31146 461 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 GGT5P36269 586 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 MTA1Q13330 715 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 MFSD14CQ5VZR4 134 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 MBOAT1Q6ZNC8 495 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 RGL4Q8IZJ4 473 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 LIX1Q8N485 282 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 NAT16Q8N8M0 369 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 NETO1Q8TDF5 533 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ZNF566Q969W8 418 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 THAP11Q96EK4 314 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 SLC47A1Q96FL8 570 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 FAM210AQ96ND0 272 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ADGRE2Q9UHX3 823 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 ZMYM5Q9UJ78 669 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 PPT2Q9UMR5 302 aa9.34□□□□□ -0.91
CNOT4-212ENST00000541284 INVSQ9Y283 1065 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms