RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	PPP1R3B	Q86XI6	285 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	SLC22A15	Q8IZD6	547 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	CARF	Q8N187	725 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ZSCAN1	Q8NBB4	408 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	PITPNM3	Q9BZ71	974 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	TWSG1	Q9GZX9	223 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	P2RY12	Q9H244	342 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	TRIT1	Q9H3H1	467 aa	Known RBP	13.23	□□□□□ -0.29
POLE-215	ENST00000540987	FGF21	Q9NSA1	209 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	SOHLH2	Q9NX45	425 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	CROT	Q9UKG9	612 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	RARRES3	Q9UL19	164 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	PLAGL1	Q9UM63	463 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ASF1A	Q9Y294	204 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	RPS6KL1	Q9Y6S9	549 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF462	Q96JM2	2506 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	BAHCC1	Q9P281	2608 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	SLC9B1P1	A6NJY1	282 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF891	A8MT65	544 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	GOLGA8K	D6RF30	607 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	GOLGA8T	H3BQL2	631 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	AP3B1	O00203	1094 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	MATN2	O00339	956 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	PRMT5	O14744	637 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	NKX2-8	O15522	239 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ZSCAN12	O43309	604 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	PHF2	O75151	1096 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	GPC4	O75487	556 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	CDH3	P22223	829 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	OAS2	P29728	719 aa	Known RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	PEBP1	P30086	187 aa	Known RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ARL4D	P49703	201 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ACY1	Q03154	408 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	CDC20	Q12834	499 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	PRKAA1	Q13131	559 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	TYSND1	Q2T9J0	566 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	CTSL3P	Q5NE16	218 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ATP1A1-AS1	Q5TC04	95 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	CCDC137	Q6PK04	289 aa	Known RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	TBC1D21	Q8IYX1	336 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	AGGF1	Q8N302	714 aa	eCLIP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	OR5K2	Q8NHB8	316 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	FLVCR1-AS1	Q8TAF5	88 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ACTRT1	Q8TDG2	376 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	STARD8	Q92502	1023 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF501	Q96CX3	271 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	STAMBPL1	Q96FJ0	436 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	MED8	Q96G25	268 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	PDLIM2	Q96JY6	352 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	TTC1	Q99614	292 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	CARD6	Q9BX69	1037 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	KLHL25	Q9H0H3	589 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	PDE7B	Q9NP56	450 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	SPHK1	Q9NYA1	384 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	ACTR10	Q9NZ32	417 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	SNX12	Q9UMY4	172 aa		13.22	□□□□□ -0.29
POLE-215	ENST00000540987	SNRNP200	O75643	2136 aa	Known RBP	13.22	□□□□□ -0.29
POLE-215	ENST00000540987	VAPB	O95292	243 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	F7	P08709	466 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	FAM87A	P0C7U9	286 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	PRKAR1A	P10644	381 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	UGT2B7	P16662	529 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	RPS3	P23396	243 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	AOAH	P28039	575 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	PRDX3	P30048	256 aa	Known RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TTPA	P49638	278 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TUBB4B	P68371	445 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	PLOD1	Q02809	727 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	C19orf57	Q0VDD7	668 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	ABR	Q12979	859 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TUBB2A	Q13885	445 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF789	Q5FWF6	425 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	PRAMEF17	Q5VTA0	474 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	SPESP1	Q6UW49	350 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	UNC5A	Q6ZN44	842 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	OTUD6B	Q8N6M0	293 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	LMNTD1	Q8N9Z9	388 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	CT55	Q8WUE5	264 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	LPGAT1	Q92604	370 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TRAPPC9	Q96Q05	1148 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	RUFY1	Q96T51	708 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	NAP1L3	Q99457	506 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	MENT	Q9BUN1	341 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TUBB2B	Q9BVA1	445 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	C1GALT1	Q9NS00	363 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	IL1RAPL1	Q9NZN1	696 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	CIDEB	Q9UHD4	219 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	GNPTG	Q9UJJ9	305 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	ANAPC5	Q9UJX4	755 aa		13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TDRKH	Q9Y2W6	561 aa	Known RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	TLN1	Q9Y490	2541 aa	Known RBP	13.21	□□□□□ -0.29
POLE-215	ENST00000540987	C2orf74	A8MZ97	194 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	GOLGA8M	H3BSY2	632 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	CES2	O00748	559 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	KIF5C	O60282	957 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	NTRK1	P04629	796 aa		13.2	□□□□□ -0.3
POLE-215	ENST00000540987	CHRM5	P08912	532 aa	Predicted RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms