RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 AP1M2Q9Y6Q5 423 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 ABCA2Q9BZC7 2435 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 HEATR9A2RTY3 570 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 A8MUI8 341 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 RASGRF2O14827 1237 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 PTPN4P29074 926 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 EPHA4P54764 986 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 HSD11B2P80365 405 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 MRPS35P82673 323 aaKnown RBP7.43□□□□□ -1.22
GNE-205ENST00000539815 NR6A1Q15406 480 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 IFI16Q16666 785 aaKnown RBP7.43□□□□□ -1.22
GNE-205ENST00000539815 KIF26BQ2KJY2 2108 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 SMTNL2Q2TAL5 461 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 TMEM200AQ86VY9 491 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 TEX9Q8N6V9 391 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 OR10Q1Q8NGQ4 319 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 CT55Q8WUE5 264 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 DLG3Q92796 817 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 KLF6Q99612 283 aaPredicted RBP7.43□□□□□ -1.22
GNE-205ENST00000539815 AGPAT1Q99943 283 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 AP1M1Q9BXS5 423 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 CHST8Q9H2A9 424 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 VCX3AQ9NNX9 186 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 FANCFQ9NPI8 374 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 STMN3Q9NZ72 180 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 RABGEF1Q9UJ41 708 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 CDC14AQ9UNH5 594 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 LUC7L2Q9Y383 392 aaKnown RBP7.43□□□□□ -1.22
GNE-205ENST00000539815 WDR81Q562E7 1941 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 ARID2Q68CP9 1835 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 TMEM150CB9EJG8 249 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 H3BUI4 141 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 PMM2O15305 246 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 PRPF4O43172 522 aaKnown RBP eCLIP7.43□□□□□ -1.22
GNE-205ENST00000539815 PORP16435 677 aaPredicted RBP7.43□□□□□ -1.22
GNE-205ENST00000539815 PCK1P35558 622 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 RAB28P51157 221 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 GUCY2DQ02846 1103 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 LAPTM5Q13571 262 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 TFDP2Q14188 446 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 SLC9A5Q14940 896 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 PDK1Q15118 436 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 OR52E8Q6IFG1 317 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 OGFOD3Q6PK18 319 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 TMEM220Q6QAJ8 160 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 LINC00696Q6ZRV3 163 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 MRGPRGQ86SM5 289 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 OR8K5Q8NH50 307 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 COG1Q8WTW3 980 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 TBC1D20Q96BZ9 403 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 FCRL4Q96PJ5 515 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 SLC12A9Q9BXP2 914 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 ASF1AQ9Y294 204 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 B3GNT3Q9Y2A9 372 aa7.43□□□□□ -1.22
GNE-205ENST00000539815 RBMX2Q9Y388 322 aaKnown RBP7.43□□□□□ -1.22
GNE-205ENST00000539815 SIGLEC16A6NMB1 481 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 NOTOA8MTQ0 251 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 PPM1DO15297 605 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 POP7O75817 140 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 CRYABP02511 175 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 THRAP10827 490 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 CD1CP29017 333 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 STAT5AP42229 794 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 PTGIRP43119 386 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 DYNLT1P63172 113 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 C1QBPQ07021 282 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 ZBTB17Q13105 803 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 PIGHQ14442 188 aaPredicted RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 HLTFQ14527 1009 aaKnown RBP eCLIP7.42□□□□□ -1.22
GNE-205ENST00000539815 FAM214AQ32MH5 1076 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 FNBP1LQ5T0N5 605 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 KLHDC7AQ5VTJ3 777 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 C1orf189Q5VU69 101 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 AGAP7PQ5VUJ5 663 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ZDHHC20Q5W0Z9 365 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 HIST2H2BCQ6DN03 193 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 C6orf89Q6UWU4 347 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 TREML1Q86YW5 311 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 CCDC185Q8N715 623 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 OR4E2Q8NGC2 313 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 GOT1L1Q8NHS2 421 aaPredicted RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 AGAP4Q96P64 663 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 SH3GL2Q99962 352 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 BPIFA3Q9BQP9 254 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 NLNQ9BYT8 704 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 NSRP1Q9H0G5 558 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 APMAPQ9HDC9 416 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
GNE-205ENST00000539815 MFHAS1Q9Y4C4 1052 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 KCNMB2Q9Y691 235 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 OR6C74A6NCV1 312 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 NOBOXO60393 691 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ZNF7P17097 686 aaPredicted RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 S100A1P23297 94 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 VAV2P52735 878 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ITGA1P56199 1179 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 GUCY1A3Q02108 690 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ZFP36L1Q07352 338 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 TLR1Q15399 786 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 VWA5B1Q5TIE3 1220 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms